Polypterus senegalus (gray bichir): 120516306
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Entry
120516306 CDS
T08668
Symbol
snx5
Name
(RefSeq) sorting nexin-5
KO
K17920
sorting nexin-5/6/32
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120516306 (snx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120516306 (snx5)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psex04990
]
120516306 (snx5)
Membrane trafficking [BR:
psex04131
]
Endocytosis
Macropinocytosis
Sorting nexins
120516306 (snx5)
Domain-containing proteins not elsewhere classified [BR:
psex04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
120516306 (snx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
FAN1_HTH
Motif
Other DBs
NCBI-GeneID:
120516306
NCBI-ProteinID:
XP_039593823
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All DBs
Position
16:complement(22747417..22790510)
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AA seq
399 aa
AA seq
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MSAAVEDLDNSKMRSVSVDLNNDSSLLIDIPDALCERDKVKFTVHTKTTINVFQKPEFSV
PRQHEDFIWLHDTLVETEEYAGLIIPPIPPKPDFESPREKMHKLGEGEASMTKDEYMKMK
QELEAEYLAVFKKTVQVHEVFLQRLSSHPVLSKDRNFHIFLEYDQDLSVRRKNAKEMFGG
FFKNMVKSADEVIISGIKEVDDFFDQEKNFLTDYYNKIRDATAKAERMTRAHKNVADDYI
HISSNLNDLSAEEAAALKMYLLKVVELFEKLRKVEARVASDEDLKLTELLRYYMRDIQAG
KDLLYRRARALADFENSNKALDKARLKSKDVAIAEEQQQLCCQKFEKISESAKKELTSFK
ARRVVAFRKNLIEMAELEIKHAKSNVSLLQSCIDLFKNN
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgcagtagaggacctggataacagcaagatgcggtcagtttcagtcgacttg
aacaacgactcaagccttttaattgacattcctgatgctctctgtgaaagagataaagta
aagtttacagttcacaccaagactacaatcaatgtctttcaaaaaccagaattttcagtg
cccagacagcatgaagacttcatatggctacatgacacccttgttgagacagaggaatat
gctgggcttataattccaccaattcctccaaagccagattttgaaagtcctagagaaaaa
atgcataaattaggagaaggggaagcctctatgacaaaagatgagtatatgaaaatgaaa
caagaacttgaagcggagtatctcgcagtatttaaaaaaacggtacaggttcatgaagtt
ttccttcaacgcctgtcttctcacccagtgctcagcaaagaccggaactttcacattttc
ttagagtacgaccaggatctgagtgtcagaaggaagaatgccaaggaaatgtttggaggt
ttctttaaaaacatggtaaaatcagcagatgaagttataatatcgggaataaaggaagtt
gatgatttttttgatcaagagaagaacttcttaaccgactattacaataaaatccgggat
gcaacagcaaaagcagagagaatgaccagagctcacaaaaatgttgctgatgactatatt
catatctcctccaacttaaatgacctttctgcagaagaagcagccgcacttaaaatgtat
ctcctgaaagtagtagaactgtttgaaaagctccggaaagtagaagcaagagtggcttct
gatgaagatctgaaattgaccgaacttctaaggtactacatgagagacattcaagctggc
aaggatcttttatacagaagagcaagggctcttgctgactttgaaaactcaaataaggca
ttggataaggccagactaaaaagcaaagatgtcgcaatagcagaagaacaacagcagctc
tgttgccagaaatttgaaaagatttcagaatctgcaaagaaagagctgaccagtttcaaa
gcaagaagagttgtagcttttcggaaaaatttaattgaaatggcagaattagaaataaaa
catgcaaagagtaatgtttcccttctgcaaagctgcattgacctgtttaagaacaattaa
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