Polypterus senegalus (gray bichir): 120516321
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Entry
120516321 CDS
T08668
Symbol
vps54
Name
(RefSeq) vacuolar protein sorting-associated protein 54
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psex01009
]
120516321 (vps54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120516321 (vps54)
Protein phosphatases and associated proteins [BR:
psex01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120516321 (vps54)
Membrane trafficking [BR:
psex04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
120516321 (vps54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
SBP_bac_6
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
120516321
NCBI-ProteinID:
XP_039593849
LinkDB
All DBs
Position
16:74939562..75056601
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AA seq
980 aa
AA seq
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MASSHSSQSVPHPSNIDNMFKKDMDSSKHFKLVRSLPDVCPKEPTVGDLHSLCDPPSIVA
DQHEWTVYDSKVNLPAALNDPRLVKRESDFFTKTWGADFIESEVMPSPYLPNVTKEDFAS
YLKETSKREKIHARCKYICPAKDELGTVCTLSNNHDKSRTDLEQVPKVFMKPDFALDDPL
TFNVVLPWSHFSGAAGKGSRVVGSSRLLQEKLIHYLDVVEVNIAHQISLRSEAFFHAMTS
QHELQDYLRETSQAVKVLRDKICHIDNVMCKESLHILRQAMTRKNCVMLYNKLKLMATVQ
QTQPTVQLLLSTSDFVGALDLIATTQEVLQQELQGIHSLRHLGSQLCELEKLIGKMMIAD
FSTYARRDLSRSLEEENQVLEEEKLVCLVLGLLKQRKLHFLEIYREEMIVAAKNVIKQCV
ISTVSYIEEIDPEVVVKLADQMRMMNFLQWLELSKNIFTTFIHFLTRIKATLNVIRSVVL
LVLDRSQKTCILDGTFSSGSSAKNSIVESEVAYLTTEGMFLSDAFGEVEQCSLETEIKNQ
RTLTVNSEPSGSDSTSDQECTTESSSSREQSSSSVTPGGVEITINEDMKLTDLELGGIAD
SIQKLLYTASDVCHDRCVKFLMARAKDGFLEKLNSSEFVALSRAVEAFAQETESICGRKS
MSLRVALQSQANKIVHRFHDERKTKLSLLLDNERWKQAEVPAEFQDLVNSIEDGKISLPE
KKTSGSEERKPADYLIVDGQKYAVVGTVLLLIRIFLEYCQCVDDIPSITTDMLTRLSDLL
KHFNSRSSQLVLGAGALQVVGLKTITTKNLALASRCLQLIVHYIPIIRAHFEARLLPKQY
SILRHFDHIMKEYNDHIAEISAKLVAIMDSLFEKVLTKYEVKAPMPSTCFRNVCKQMAKM
HEAIYDLLPEEQTQMLFLRINASFKLHLKKQLTRLAVVNDGGPQHGLVMADVAFYTGNIQ
ALKTLENLDLNMAEIWKQKR
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagccacagttcccagtctgtgcctcatccaagcaacattgataatatgttt
aagaaggatatggattcttcaaagcactttaaactcgtccgatcactacctgatgtttgt
ccaaaggaaccaacagtaggtgatctccatagcttatgtgatcctccatcaattgtggca
gatcaacacgaatggactgtttatgactccaaagtgaatcttcctgcagcattaaatgat
ccaagattggtgaagagagagtctgacttttttacaaaaacttggggtgcagattttata
gaaagtgaggttatgccatccccttacctcccaaatgtcaccaaggaagactttgcatct
taccttaaagaaacctcaaagagagaaaaaattcatgcaaggtgcaagtatatttgtcca
gctaaagatgaacttggcactgtctgcactctttcaaacaaccacgataaatcaagaact
gatctggaacaagtacccaaggtattcatgaaaccagattttgccttggatgatccattg
acatttaatgtggtgttgccatggtctcacttcagtggagcagctggtaagggcagtcga
gttgtggggtcttcaaggttgcttcaagaaaagttgatccactacttggacgttgtagaa
gtgaatattgcacatcagatttctctgcgatctgaagccttctttcatgctatgacctct
caacacgagttgcaggactacctcagggaaacttcccaggctgtaaaggtgcttcgtgac
aaaatctgtcatattgataatgtaatgtgtaaagagtctttacatattttgagacaagca
atgactagaaaaaactgtgttatgctgtacaacaaattaaagctaatggcaactgtccaa
caaacacaaccaacagtacagttactgttgtctacttctgattttgttggggcattggat
ttaattgcaacaacacaggaggtgctgcagcaggaacttcagggtatacatagtctcagg
catttaggatcgcagttgtgtgagcttgaaaagctcataggtaaaatgatgatagcagat
tttagcacatatgcaagaagagatctaagcagatcacttgaagaagaaaatcaagtccta
gaagaggaaaagttagtatgcttggtacttggattattaaaacaaagaaaacttcatttt
ttggaaatctatagggaagaaatgattgttgctgcaaaaaatgtgataaaacagtgtgtt
ataagcaccgtttcatacattgaagaaatagatcctgaagttgttgtgaaacttgcagat
cagatgagaatgatgaactttcttcaatggctagaactttcaaagaacatatttacaact
tttatacattttctaaccagaattaaggcaaccctcaacgtcattagaagtgtagtcctg
ctggttttggacagaagtcagaaaacatgcatccttgatgggacttttagtagtggaagc
tcagcaaaaaactccattgttgaatctgaagtagcatatttaacaactgaaggaatgttt
ttaagtgatgcttttggagaagtggagcaatgttcattagaaacagagattaaaaaccaa
aggacattaactgtaaattcagaaccttctggcagtgactctacttcagatcaggaatgc
actacagaatcatcttcaagcagagagcagtcctcatcttcagttactcctggaggagtg
gagataacaattaatgaagatatgaagctgacagaccttgaactaggaggaattgcagat
agtattcagaagttgctttacacagcctctgatgtatgtcatgaccgatgtgtcaaattt
ctcatggcaagagctaaggatggcttccttgaaaagctaaattcatcggaatttgttgcc
ctttctcgggctgtggaggcctttgctcaggaaacagaatccatttgtggaagaaagagt
atgtctttaagggtggctttgcagagtcaagccaacaagatagttcaccgcttccatgat
gagagaaagacaaagttaagtcttctgttagataatgaacggtggaagcaggcagaggtt
ccagctgaatttcaggatcttgtaaattcaattgaagatgggaaaataagtttacctgag
aaaaagacctctgggtctgaagaaagaaaaccagcagattacttaattgtagatgggcag
aaatatgctgtagtggggacagtcctgcttttgattcgtattttccttgagtattgccag
tgtgtggatgatatcccatcaataactacagacatgctgacacgtttgtcagacttacta
aagcactttaattcaaggagctctcagcttgttttaggagctggagcattacaagttgtg
ggtctaaaaacgatcactaccaaaaatttagctcttgcttcacgttgtcttcagctcatt
gtgcactacattcccatcatcagggctcactttgaagcacgtctacttccaaagcagtac
agcattctcaggcattttgaccacatcatgaaggaatacaatgaccacattgctgaaatc
tctgcaaaacttgttgcaattatggatagcttatttgaaaaagttttaactaagtatgaa
gtcaaagcaccaatgccatcaacctgttttcgaaatgtctgcaaacaaatggctaagatg
catgaagcaatatatgatctactgcctgaggaacaaacacagatgttgttcttaaggata
aatgcaagctttaagcttcacctgaagaagcagctgactcgactggctgtagtaaatgat
ggtggcccacaacatggacttgttatggcagatgttgccttctacactggaaatatacaa
gcactgaagacacttgaaaatttagatttgaacatggcagagatttggaaacagaagagg
tga
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