Polypterus senegalus (gray bichir): 120516375
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Entry
120516375 CDS
T08668
Name
(RefSeq) exportin-5 isoform X1
KO
K14289
exportin-5
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120516375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psex03016
]
120516375
03036 Chromosome and associated proteins [BR:
psex03036
]
120516375
Transfer RNA biogenesis [BR:
psex03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
120516375
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
120516375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Sec3_C-term
Motif
Other DBs
NCBI-GeneID:
120516375
NCBI-ProteinID:
XP_039593933
LinkDB
All DBs
Position
16:complement(32094870..32148348)
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AA seq
1211 aa
AA seq
DB search
MSTDQVNALCEQLIKAVNVMMNGESSQRYRLEALKFCEEFKEKCPICVECGLKLAEKSQP
ALVRHFGLQILEHCVKYRWNNMQQEDKDFLKNDVMGLISTGVCPILEEEGHIKDVLSRIV
VEIIKREWPQHWPDMLRELESLTKLGEVQTELVMFVLLRVAEDVVTFQTLPAQRRRDIQQ
TLSQYMDKLFGFFLNILQQNVNKYRKMKTDPSQDSKAKAHCRVGIATLNTLAGYIDWVAL
NHITSDNCRLLEMLCLLLSETELQLEAAECLLIAVSRKGKLEDRKPLMVLFGDVAMYYIF
SAAQSAHGAGLTERKYIFLKRLCQVMCALGNQLGALLGSDVDIEIPNNYGKYLEAFLAFT
THPSQFLRSSTQVCWGSLFRHDALSKNPLTIQTTLKYLRATMTNLVKVGFPSKYDSPSCE
YSRMDFDGDEDFNAFFNSFRAQQGEVIRSSCKLVPMEAFHMAGEWLHYQLNTSIDVGPTT
SKTAEWLCSIFSPSYVQWDAMTFFTESVVCQLFRVVDKEALPLDDGVKLLQEVLNYETRD
PLILSCVLTNVSTFFPFVKYRTEFLPQVLSKLFASVTFEVIEESKAPRTRAVKNVRRHAC
SSIIKMCRDYPQLIHPCFDMLYNHVKQLFSNEMLLTQMEKCALMEALVLVSNQFKCYEKQ
KIFLEELMGAVSTRWLSGEMTQVLSDPGMFVSFVGADQTITDPITDDPCGINRSRISFCV
YTILGVVKRARWPRELEEAKAGGFVVGYAPNGNPIFRNPCSEQVGKLLDNLLALIRTHNN
LFSPENSARLSETFSKAFDMMEVEKNAVLGLPQPLLDLYDSPVYKTVLERMQGFFCTLYD
NCYHILGNAGPSLEQDFYNIPSLAEKLVNSAFINLVFVPDYRLRPMLRVFLKQLVVSCPA
EYYDSLICPILRPLFSFLLQRLNQKWQILNQKTSDLCDSEESLEEGQVSQEMLEEQLLRL
VTREVVDLICVCCIMKKGAEPPVPKDDLDEEEMMATDASHTHASDELTELGKCLLKHEVP
GDGTLLELYTTLLTIAFSSLSWKDTITSQRTANQVCWPLLKQVIGGNLLGDAVSWFFISI
LRGLHVHGQHEGCSVALTQLAFVVYEALRPRYSELKVVMEQIPNIQKEDLVQFDMKLMNQ
SQHKISDKKRKDYFKRLISGSFGKPLGQQFKKEVHIKNLPSLFKKTKPEAPDILDTEKVE
LSSLFTSADDI
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgatcaggtgaatgcgctttgtgaacagttaatcaaagcggtgaacgttatg
atgaatggagagtccagtcaaaggtaccgactggaggctttgaagttttgtgaagagttt
aaagaaaaatgtcccatttgtgttgaatgtggtttaaaactagccgaaaaaagccagcca
gcactagtgaggcactttggccttcagatattggagcattgtgttaagtatcgttggaac
aacatgcaacaggaagataaagattttttaaaaaatgacgtgatgggattaatatcaacc
ggtgtttgtcccattctggaggaagagggtcatattaaggatgttttgtcccgtattgtg
gttgaaattatcaagagagaatggccacagcattggcctgatatgctgagggaactggag
tctcttactaaacttggagaagttcagacagagctggtgatgtttgtcctgctgagagta
gcagaagatgtggtgacattccagacactccctgcccaacgtcgtcgtgatatccagcag
accctttcccagtacatggataaactttttggttttttcctcaacattctacagcagaat
gtgaacaaatatcgtaaaatgaaaaccgatccatcacaggacagcaaggctaaagctcac
tgccgtgttgggatagcaacactgaacaccttagctggatacatcgactgggtggcttta
aatcacattacaagtgataattgtcgactacttgagatgctttgtcttttgcttagtgaa
actgagctacagctggaagctgctgagtgtctgcttattgcagtgagcagaaagggaaaa
ctagaagatcgaaaacctctgatggttttgtttggtgatgtggcaatgtactacatcttt
tctgctgcccagtcagcacatggagcaggacttactgaaagaaagtatatattcttgaaa
agactgtgccaggtcatgtgtgccttggggaatcagttgggtgcgcttctgggttctgat
gttgatattgaaatccccaacaactatggcaaatatttggaagcattccttgcatttact
actcatccaagtcagtttttaaggtcctctacacaagtctgttggggctctttatttaga
catgatgctctttcaaaaaatcctcttaccatccagacaactttgaagtatttgagggcc
actatgactaatcttgttaaggttggctttccttcaaaatatgatagcccaagctgtgaa
tattcacgtatggactttgatggtgatgaagattttaatgcattttttaactcgttccgt
gctcaacaaggtgaagtgattcgcagttcatgcaagctggttcctatggaggctttccac
atggcaggagagtggttgcattatcagttgaatacatccattgatgttggcccaactact
tctaaaactgcagaatggttgtgctcaatattttctccatcatatgttcaatgggatgcc
atgacatttttcacagagagtgtggtctgtcagttattcagggttgtggacaaagaggca
cttccattagatgatggagtaaaactgctgcaggaagttctgaattatgaaacaagagat
ccactgatactttcttgtgttttgacaaatgtatccacatttttcccatttgttaaatac
cgcacagaatttcttcctcaggttttgtctaagctatttgcatcagtaacatttgaggtg
attgaagaaagcaaggctcccagaactcgagctgtgaaaaatgtgcgaaggcatgcatgt
tcctccattataaagatgtgcagagattatccacagctaatacacccctgttttgatatg
ctttataaccatgtgaagcaactgttttcaaatgaaatgctcctgacacagatggagaag
tgtgcattaatggaggcacttgtccttgtcagtaatcagttcaagtgttatgagaagcag
aagatattcttagaggaactaatgggagctgtctccacacgatggctgtctggtgaaatg
acacaagtgctttcggatcctggaatgtttgtctcctttgttggtgctgaccagacaata
actgatcctatcacagatgatccgtgcggaatcaacagatcaaggataagcttttgtgtg
tacacgattctgggcgtagtgaaacgggcccggtggcctcgtgaactggaagaagccaaa
gctggaggatttgtggtcgggtacgcccccaacggcaatccgatcttccgcaacccctgc
agcgagcaggttggaaaacttctcgacaacttgctcgctctcataagaactcacaacaac
ctgttctcacctgaaaattctgctaggcttagtgaaactttctctaaagcctttgacatg
atggaggtagagaaaaatgctgtactgggcctgcctcagcctctgttagacctatatgat
tctcctgtatataaaacagtactggaacgaatgcagggattcttctgtacattgtatgac
aactgttatcacattttaggtaatgcaggcccttctttggaacaggatttctacaatatt
cccagccttgctgaaaagttggtcaactctgcctttatcaatcttgtgtttgttccggac
taccgtctccggccaatgcttcgtgtgtttttgaagcagcttgttgtctcctgcccagca
gaatactatgatagtctcatttgtcccattcttcgacctctcttttcttttcttctgcag
aggcttaatcagaagtggcagatccttaatcagaaaacaagtgatctctgtgactctgaa
gaatctcttgaagagggtcaggtatctcaagagatgcttgaagaacagctattgcgacta
gtgaccagagaagttgttgatttaatctgtgtttgctgtattatgaaaaaaggagcagaa
ccaccagttccaaaagatgatttggatgaggaagagatgatggctacagatgcttcccat
actcatgcatccgatgaactgacagagcttggaaagtgcctgctgaagcatgaggtacct
ggagatggcactctgctggaactttacacaacactcctgacaattgcatttagcagcctt
tcctggaaagacacaataaccagccaaagaactgcaaatcaggtttgctggcctttgctt
aaacaggtaattggaggtaatctgttaggtgatgctgtatcctggtttttcataagcatt
ctccgaggtttgcatgtgcatgggcagcatgaaggatgcagtgtggctcttacacagctt
gcatttgttgtttatgaggcactgagacctcggtacagtgagctgaaagtagttatggaa
caaatccccaatatccagaaagaagacctggttcagttcgacatgaaattgatgaaccag
tcacaacacaaaatttcagataaaaaaagaaaagactactttaaacgactcatctctgga
agttttgggaaacctcttggacaacaatttaagaaggaagttcatattaaaaatttgcca
tcactcttcaagaagacaaagccagaagccccggatatactcgacacagagaaggttgag
ttgagcagtctgtttacatccgctgatgacatataa
DBGET
integrated database retrieval system
