Polypterus senegalus (gray bichir): 120516440
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Entry
120516440 CDS
T08668
Symbol
srbd1
Name
(RefSeq) S1 RNA-binding domain-containing protein 1
Organism
psex
Polypterus senegalus (gray bichir)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
Tex_central_region
S1
HHH_9
HHH_7
YqgF
RNase_II_C_S1
HHH
HHH_6
TFIID_20kDa
TEX12
Motif
Other DBs
NCBI-GeneID:
120516440
NCBI-ProteinID:
XP_039594028
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All DBs
Position
16:87295852..87685338
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AA seq
1003 aa
AA seq
DB search
MIRRTRVTTCKPQYCEDDDESLLDDTAEDEFEDEDEWKPQEKKTKVSKNISASRQKTRAP
KTEKAKVQRKTAVRRKKAEKGEETSVTQALEHEPVEPLKNVKEERLSFALPNVEHNEQEK
FSDAPVKEEMSSPAQKISTPRKKRVTSKVQAKHEQKSAVGFSTEEPTCSSLSSAAKKEEQ
EEDFNFDEAPLKKMKTSKCPEGKPVKFCKSRDKDTDLKMNWDLIQVLSEKTAVDPWVCEN
LVTLFNDDNTIPFIVRYRKELINYMDADAVRDVQMHLEELRTIAKKVHTVIQTLKKEGVL
TADLQNSLLNCRTPDELDHVYAPYKKGSKLTKARRARELGLEPAALALLENPQDLNLHSY
IKPDTPGCAALAEVEAGVQQILADIIAKDKDTIHYIKGLCEMNYLTIHSVLSKTALKEQK
DENTTKQRDLDKFQLYSDFKASIKTVQHHQILAINRGENLKILTVKVNIPDRVKNEFCRW
CVNVRWRPKGYAREELFKILKDAVEDSYKRLIYPLLCRTYRSNLTSSAEKESIAMFVRNL
RQLLLTSPVRGRCIMGVDPGYKHGCKLAIISPTSQILHTDVVYLHKHGKDREAEKIRHLL
KLHSCYTVVIGNGSACRETEAFFAELIANQYFRPLDVVYCITNEAGASIYSVSPEATKEM
PDLDPNLRSAVSIARRVQDPLAELVKIDPKHIGIGTYQHDVSQALLKAALASVVEECVSF
VGVDINICSETLMRHIAGLNAGRAKNIIEWREKNGPFINREQLKKVKGVGPTSFQQCAGF
IRINPENLRNTCSGSQPYGEATSTEESTSKASSKKSKAATSSSAPKFNPLDQTCIHPESY
DTTVRFLLQIGGKLEDIGKPEMKLKVDCAIQQQGLEQFAQVLNTPTPTLQIIIDGLTQPQ
GFDIRQDFEKPAFKRGIVSMDDLTVGAVLTGRVENTALFGAFVDIGVGTSGLIHKKYITE
AKLPQDKRRRSLALGPGERVEVRVLNVDPGRGRIGLDLLRVLK
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgatacgaagaacgcgtgtcaccacgtgcaagccacagtattgcgaagatgacgatgag
tcattgttggatgacactgctgaagatgaatttgaagatgaggacgaatggaaacctcag
gaaaaaaagacaaaagttagtaagaatatatcagcttctcggcagaaaacccgggctcct
aaaacagaaaaggcaaaagttcagagaaagactgctgttagaagaaagaaggcagaaaag
ggagaagagacctctgtcacccaagcactggaacatgaaccagtggaaccattgaaaaac
gtcaaggaagagagattgtcatttgctttgcccaatgttgagcacaatgagcaggagaag
ttttctgatgcaccagtcaaagaggaaatgagcagtcctgcacagaaaatatccacacca
aggaagaaaagagtcacttctaaagttcaggccaagcatgaacaaaagagtgcagtaggt
ttttcaacagaagaaccaacctgcagctctttgtcatcagctgcaaagaaagaggagcaa
gaagaggactttaattttgatgaggcacctttaaagaagatgaaaaccagcaagtgtcct
gaaggaaagccagtcaaattttgtaaatcccgggacaaagacactgacttgaaaatgaac
tgggatttaattcaggttttgtctgagaagactgctgtagatccctgggtgtgtgaaaat
ctagttactttgtttaatgacgacaatacaattccatttattgttcgctatagaaaggag
ctaatcaattatatggatgcagatgcagtcagagatgttcagatgcaccttgaagagcta
aggaccatcgcaaaaaaagttcacacagtgatccagactttgaagaaagaaggagtgttg
acagctgatttacaaaattcactgctaaactgcaggacccctgatgagctagatcatgtg
tatgcaccctacaagaaagggagcaagctgacaaaggccaggcgggcaagagaacttggc
ctagaaccagctgccttggctttacttgaaaatccacaggatctcaacctgcattcctat
ataaagcctgatactccaggctgtgcagcactagctgaagttgaagctggggttcagcag
attttggcagacataattgcaaaggacaaagacacaatccactacattaaaggactgtgt
gaaatgaactatcttaccatccattctgtgttgtcaaaaacagcattgaaagaacaaaaa
gatgaaaatacaaccaaacaaagagacctagataaattccaactgtactctgacttcaaa
gccagtattaaaactgtacaacaccaccagattctggccattaaccgaggggagaatttg
aagatactgacagtgaaggtcaacattcctgacagggtgaagaatgaattctgtcgctgg
tgtgtcaatgtaaggtggagacccaaaggctatgccagagaagagcttttcaagatattg
aaggatgctgttgaggattcctacaaaaggctgatttatcctttgctgtgcagaacatat
aggtctaatttgacttcaagtgccgagaaagaatctattgcaatgtttgtccgaaacctc
cggcaactgctcctcacaagtcctgtcaggggtcgatgtatcatgggagtggacccaggc
tataaacatggctgcaagttggcaatcatttctcctacaagccagattctccatactgat
gttgtgtatttacataaacatggaaaagatcgagaagctgaaaagataaggcacctattg
aaattacatagttgttatactgttgtgattggaaatgggtctgcctgccgagagacggaa
gcattttttgcggagctcattgccaatcaatacttcaggccattggatgttgtatattgt
atcactaatgaagcaggagcttctatctatagtgtgagtccagaagccactaaggaaatg
cccgatcttgatcctaatctaagaagtgcagtatcaattgcacgacgagttcaagaccct
ttagctgagctggtgaaaattgacccaaagcacattggaattggcacctaccagcatgat
gtgtcacaggccctcctgaaagctgccttggccagtgtggtggaggaatgtgtcagtttc
gttggagttgacattaacatctgctcagagacgctgatgagacatattgcaggactgaat
gcaggacgagccaagaatattattgaatggcgtgaaaaaaatggaccattcataaacagg
gaacaactgaaaaaggtgaaaggagtggggccaaccagcttccaacagtgtgcgggcttt
ataagaatcaatcctgagaatttaaggaacacttgcagtggcagtcagccgtacggagaa
gcaacaagcactgaagagtcaactagcaaagcatcctccaagaagagtaaggctgccact
tcaagctctgctccaaagttcaacccactagaccagacttgcatccatcctgagtcctac
gatactactgtgaggttcctgctgcagattggtgggaagctggaagacatagggaagcca
gaaatgaagttgaaagtggactgtgccattcagcagcaaggcctagagcagtttgcccag
gtgctgaacactcctacgcctactctacagattatcattgatggtttgacgcagccacag
ggctttgatatccgccaagattttgaaaaaccagccttcaagcgaggaatagtttctatg
gatgatctcactgttggcgctgtgttgactggccgagtggaaaacactgcactctttgga
gcttttgtggacattggggtgggcacatcaggtttaatccataaaaaatacatcactgaa
gccaaactaccacaggataagagacgacgaagtttggccctggggcctggagaaagagtt
gaagtacgggtgctcaacgttgatccaggaagaggccgcattgggctcgaccttctgcgt
gttttaaagtga
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