Polypterus senegalus (gray bichir): 120516496
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Entry
120516496 CDS
T08668
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120516496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120516496
03016 Transfer RNA biogenesis [BR:
psex03016
]
120516496
Enzymes [BR:
psex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
120516496
Messenger RNA biogenesis [BR:
psex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
120516496
Transfer RNA biogenesis [BR:
psex03016
]
Prokaryotic type
tRNA degradation factors
120516496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
Motif
Other DBs
NCBI-GeneID:
120516496
NCBI-ProteinID:
XP_039594134
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All DBs
Position
16:67006012..67134128
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AA seq
794 aa
AA seq
DB search
MAPSRQYVWHPVRLLSCLQIPFAGRMQDLFRLPSKLARIRSRSCHYSAWTKHSIQNNVVV
HLGERNIEISSGKLARFADGSAVVQQGETSVMVTAVSKTKPSVSQFMPLVVDYRQKAAAA
GRIPTNYLRRELGSTENEILKSRLIDRSIRPLFPSGYFYETQIACNLLAVDGVNDPDILA
INGASAALTLSDIPWNGPVGAVRVGLINGEFVINPTRKEMASSTLNLLVTGSAHNQVVML
EASAENVLQQDFCHAIKVGVKQTQQIIQGILQLANDHGLSKRTPQKLFAAVPEMVELAGQ
LASEKIHAVLSDFNHDKISRDEAINKIRLETEEHLRVKFPDADSYEVMEAFNTLLKETFR
NIILNEYRRCDGRDLTSLRSISCEVDLFKPLHGSALFQRGQTQVLCTVTFDSLESSMKAD
HISTAVSGLKDKNFMLHYEFPPYATNEIGKVSGLNRRELGHGALAEKSLRPVIPKDFPFT
IRVTSEVLESNGSSSMASACGGSLALMDAGVPISSAVAGVAVGLVTKINTEKPSEVQDYR
LLTDILGIEDYNGDMDFKMAGTNKGITALQADIKIPGLPLKIVMEAIQQATVAKKEILAI
MNKVISKPRTQRKENGPLVESIHVPLSKRARFVGPGGYNLRKLQAEAGVTISQVDEETFS
VFAPTPNAMHEAKEFINEMCKDDQEQQLEFGAVYTATITEIRDIGVMVKIYPNMSPVLLH
NTQLDHKRIKHPSALGLEVGQQIQVKYFGRDPTDGRMRLSRKVLQSPAATVVKTLSGQHS
ITVGAANAHCTNSS
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggcaccctccaggcagtacgtatggcacccggttcgcttgttgtcttgtcttcagatt
cctttcgcgggcagaatgcaggatctattcaggttgccctcaaagttagcacggattcgg
tcacgaagttgtcattacagtgcgtggacgaagcactcgatccagaacaatgtagtagtt
catctcggtgaaagaaatatagagatttcatctggaaaattggctcggtttgcagatggt
tctgcagttgtgcagcaaggggaaacatctgtgatggtgacagctgttagtaaaactaaa
ccatcagtttctcagtttatgcctttggttgttgattaccgacagaaagcagcagcagct
gggaggattcctactaattatctcagaagggagctcggctcaacagaaaatgaaatactt
aaaagcagactgatagatcgatcaataagaccacttttcccatctggctatttctatgaa
acacaaatagcatgtaatcttttagctgtggatggcgtcaatgaccctgatatattagca
attaatggagcctcagctgcccttacactgtcagacattccatggaatggaccggttggt
gctgtgcgggttggtcttattaatggagaatttgtgattaatccaacaaggaaggaaatg
gcatcaagcactcttaacctgctagttactggctcagctcataaccaagtcgttatgttg
gaagcttcagcagaaaatgtacttcaacaggatttttgccatgctattaaagttggagtc
aaacagacacagcagatcattcagggtatcctgcagctggcaaatgatcatggtttatca
aaacgaactccccaaaagttgtttgctgctgttccagaaatggtcgagcttgctggccag
ttggcttctgagaagatccatgcagtgctttctgactttaatcatgataaaatttctagg
gatgaagccattaataaaataagacttgaaacagaagagcacttaagagtaaaatttcca
gatgctgattcatatgaggtgatggaggcgtttaatacacttttaaaggagacattcaga
aacataattttaaatgaatacagaaggtgtgatgggagagatttaacatcgctgagaagc
atttcctgtgaagttgacttgtttaaacctcttcatggttctgcattgtttcaaagaggc
cagacacaggtgctttgtactgtgacatttgattctttagaatcaagcatgaaagctgac
catatatcaacagctgttagtggtttgaaagacaagaactttatgctgcattatgagttt
cctccctatgcaaccaatgaaattggaaaggtcagtggtttgaaccggagagagcttgga
catggtgcattggctgaaaaatctctgagacctgttatacctaaagatttccctttcaca
atccgagtaacatcagaggttttagagtcaaatggatcatcttctatggcttctgcatgt
ggtgggagtttggcactaatggatgcaggtgttccaatttcatctgcagttgcaggtgtt
gctgtgggattagtaacaaaaataaatacggagaagccgtcagaagttcaagattataga
ttgctcactgacatcttaggaattgaagattacaatggggacatggactttaaaatggca
ggaacaaacaaaggcattacagcattacaggcagatattaaaatcccaggtcttccccta
aaaattgtgatggaagcaattcaacaagctacagtggctaaaaaagagatacttgcaata
atgaacaaggtaatttcaaagccaaggacacaaagaaaggaaaatgggccacttgttgaa
agcattcatgttccactttcaaaaagggcaagatttgttggccctggaggttataactta
agaaaactccaagctgaagcaggtgtgacgatcagtcaggtagatgaggagacattttct
gtctttgcaccaacacccaatgctatgcatgaggccaaagaattcatcaatgaaatgtgc
aaagacgatcaagaacaacagttggaatttggagcagtgtatacagcaacaatcacagag
attagagacattggagttatggtaaagatctatccaaacatgagtcctgtattgcttcat
aatactcaactagaccataagaggattaagcatccatctgctcttggattagaagttgga
cagcaaatacaggttaaatactttggtcgggatcctactgatggcaggatgcggttatca
cgtaaagtgctccagtctccagctgcgacagttgtgaaaacattaagtggccaacacagc
attacagtaggagcagcaaatgcacattgtacaaactcttcttga
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