Polypterus senegalus (gray bichir): 120516504
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Entry
120516504 CDS
T08668
Symbol
jag1b
Name
(RefSeq) protein jagged-1b
KO
K06052
jagged-1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04330
Notch signaling pathway
psex04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120516504 (jag1b)
04371 Apelin signaling pathway
120516504 (jag1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
psex04090
]
120516504 (jag1b)
CD molecules [BR:
psex04090
]
Proteins
120516504 (jag1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
EGF_DL_JAG
EGF_2
DSL
EGF_Teneurin
JAG1-like_EGF2
EGF_CA
cEGF
EGF_3
Neur_chan_memb
Peptidase_S46
DUF6479
MAP17
Motif
Other DBs
NCBI-GeneID:
120516504
NCBI-ProteinID:
XP_039594149
LinkDB
All DBs
Position
16:49827490..49860612
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AA seq
1215 aa
AA seq
DB search
MILRRSSFLAAFPLHVALLCFHVKVSISSGHFELQILSMQNVNGELQTGVCCDGSRNVGD
QKCLRGECDTYFKVCLKEYQSRVSAAGPCSFGSGSTPVIGGNTFSLKSSMNNEKARIVLP
FSFAWPRSYTLIVEALDFSNETNVSNNNAGSKIIEKAVHSGMINPNHPWQPLRHDGTNAQ
FEYQIRVICDEHYYGFGCNKFCRPRDDFFGHYNCDHNGNKTCLEGWSGPDCNTAICRQGC
SSEHGSCKFPGECRCLYGWQGQYCDKCIPHPGCVHGTCIEPWQCLCETNWGGQLCDKDLN
YCGTHQPCLNGGTCSNTGPDKYQCSCPDGYSGVNCEKAEHACLSDPCLNGGSCVETSSGY
ECQCAAGWKGPTCMINIDDCESNPCGHGGTCQDAVNGFNCICPPQWTGKTCFIDANECEG
KPCVNANSCRNLIGAYFCDCLPGWEGQNCDINIDDCHGQCQNGGSCKDLVNGYRCVCPPG
YAGEHCEKDINECASNPCLNGGSCLDEVNGFQCLCPGGFSGNLCQLDIDYCEPNPCQNRA
QCFNLASDYFCGCTEDYEGKNCSRLKDHCRSTTCEVIDSCTVAVASNSTPEGVRYISSNV
CGPHGKCKSQAGGKFTCECKEGFTGTYCHENINDCASSPCRNGGTCIDKVNIYQCICSDG
WEGIHCETNINDCKIKPCHNGGTCRDLVNDFYCECKNGWKGKTCHSRESQCDEATCNNGG
TCSDKIDTFKCMCSPGWEGTTCNIAKNSSCLPNPCENGGTCVINGDSFTCVCKEGWEGVT
CTQNTNDCSPHPCYNSGTCVDGDNWYRCECAPGFAGPDCRININECQSYPCAFGATCVDE
INGYRCICPPGRKGPRCEEATGRPCIVNSQVIQDGNSWEEDCNTCMCLNGKITCTKVDCG
PKSCWIHGKARDDCPPDHICIPIREDQCFVPPCTGLGECWESNQPPHRLKCSPGSTFQDE
SCANITFTFNKEMMHPGLSTGHICKELRSLYVMRNLSLEYSVYMICEPSTTANNEIHVVI
SAEDQRHGRNPIKDITDKIIDLFSKRDGNSSIISAIAEVRVQQRPVQSKTDYLVPLLSSI
FIVIWIFALITAFLWCMRRRRKQSTHTHTPVEDTTTNNVREQLKQIKNPIEKQTDYENKN
CIIAKIRTHNSEVEEDDVDKHLQKTRFTKQPVYTLVDREDKSAHTTPTKNPNWTNKQDNR
DLETAQSLNRLEYIV
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgattttgagacggagttcgttccttgcggcttttcctttacatgtcgctttgctctgc
tttcacgtaaaggtgtcaatatcatcaggacacttcgagttgcaaattttgtcgatgcag
aacgtcaatggcgagttacagaccggcgtatgctgtgacggatcgcggaacgtgggagac
caaaagtgtttgcggggcgagtgtgatacctatttcaaagtgtgcttgaaggaataccag
tcgagggtttctgcagcggggccttgcagcttcggttcgggatctactcctgtcatcgga
ggcaacaccttctccttaaaaagttccatgaataacgaaaaagccaggattgtactacct
ttcagcttcgcgtggccgaggtcctacacgctaatagtggaagctttggatttcagtaat
gaaactaacgtcagcaacaacaatgctggatcaaagataattgagaaggctgtacattct
gggatgatcaacccaaatcatccttggcagcctctgaggcatgatggtactaatgcccaa
tttgaatatcagatacgtgttatctgtgatgaacattactatggatttggttgcaacaaa
ttttgccgacctagggatgacttttttggacactacaattgtgatcataatggaaataaa
acctgtctggagggttggtctggacctgactgtaatacagctatctgccgtcagggctgc
agcagtgaacatgggagctgtaaatttcccggagagtgcaggtgcctttatggatggcaa
ggacagtactgtgataaatgcattccccacccaggatgtgtccatggaacttgcattgaa
ccttggcagtgcctctgtgaaaccaattggggaggtcaactttgtgacaaagatttaaac
tattgtgggacccatcagccatgcctgaatggaggtacctgcagtaacactggaccagac
aaataccagtgctcttgccctgatggctattcgggagtcaactgtgaaaaagctgaacat
gcttgtctctcggatccctgtctcaatggtggtagctgtgtggaaacaagctctggctat
gagtgtcagtgtgctgctggctggaaaggccccacttgtatgataaatattgatgactgt
gagagtaatccttgtggccatggtggtacctgtcaggacgcagtgaatggatttaactgc
atttgtcctccgcagtggactggaaaaacgtgcttcatagatgccaatgaatgtgaaggc
aagccatgtgttaatgccaattcctgccgtaatctgattggtgcatacttttgtgactgt
ttgcctggatgggaaggccaaaactgtgacattaatattgatgactgtcatgggcagtgt
cagaatggaggatcctgcaaggatttagtaaatggttatcgttgtgtctgtccacccgga
tatgctggagaacattgtgagaaagacatcaatgaatgtgcaagcaacccatgcctaaat
gggggaagctgcctcgatgaagtcaatggattccagtgtttgtgtccaggtggtttctct
ggaaacctctgtcagcttgatatagactactgtgaaccaaatccttgtcagaacagagca
caatgctttaaccttgcaagtgattatttctgtgggtgtactgaagactatgagggaaag
aactgttctcgcctcaaagaccactgtcgttccacgacttgtgaagtgatagacagttgt
acagttgcagtagcttctaatagcactcctgaaggtgttcggtacatctcctccaatgtc
tgtggtcctcatggaaaatgcaagagccaagcaggaggcaaatttacctgtgaatgtaaa
gaaggcttcactggaacttactgtcatgaaaatattaatgattgtgcaagtagcccttgc
agaaatggtggaacttgtattgacaaagtgaatatttaccagtgtatctgcagtgatggc
tgggaagggattcactgtgaaactaatatcaacgactgcaaaataaagccgtgccacaat
ggaggcacatgtcgagacttggtgaatgatttctactgtgaatgcaagaatgggtggaag
ggaaaaacatgccactcccgtgaaagtcaatgtgatgaagccacatgtaacaacggcgga
acatgctctgacaaaatagatacttttaaatgcatgtgttctccaggctgggaaggaact
acttgcaatatagccaaaaatagtagttgcctgccaaacccatgtgagaatggaggaacc
tgtgttatcaacggagactcttttacctgtgtttgtaaagaaggctgggaaggtgttaca
tgcacacaaaatactaatgattgcagtccacacccctgctacaacagtggaacatgtgtg
gatggagacaactggtatcgatgtgaatgtgccccaggctttgcaggcccagactgtcgt
ataaatatcaatgaatgtcagtcatacccatgtgcatttggggcaacatgtgtggatgaa
attaatggttatcgctgcatttgtccccctggcagaaaaggacccagatgtgaggaagct
actggaagaccttgtattgtcaacagtcaggtcatacaagatggtaacagttgggaggag
gactgtaacacgtgcatgtgcctaaatggaaagattacatgtacaaaggttgactgtgga
cccaaatcttgttggatacatggcaaagcccgtgatgactgcccaccggatcacatttgt
attcctataagagaggaccagtgttttgtgcccccttgtactggacttggtgaatgctgg
gaatcgaatcaaccaccacatagactgaaatgttctcctggttcaacttttcaggatgaa
agctgtgctaacattactttcacctttaataaggagatgatgcatccaggccttagcact
ggacatatctgtaaagagctacgcagtctctatgttatgagaaacctttcattggagtat
tcagtctatatgatatgtgaaccttcaactacagccaataacgaaatccatgtggtcatt
tctgcagaagatcaaaggcatggcagaaaccctatcaaggacattactgacaaaattatt
gatctcttcagtaaacgcgatggaaacagcagcatcatatcagccatagcagaagtccgg
gtacagcaacgtccggttcagtctaagacagattacctggtgcctttgctgagttctatt
tttattgtcatttggatctttgctttgatcactgctttcttgtggtgtatgcgcagacgg
cgaaagcaaagcacccacacgcatacaccggtcgaggacaccactaccaacaacgttcgc
gaacaactcaaacagatcaaaaatcccatagagaaacaaactgattatgaaaataaaaac
tgtataattgcaaaaattaggacacacaactctgaagtagaagaagacgatgtggacaag
catctgcagaagactaggtttaccaaacagccagtttacacactggttgacagagaagac
aaatctgcacataccacaccaacgaaaaacccaaactggacaaacaaacaagacaacaga
gacttggaaacggcacagagcttaaatcgattggaatatattgtatag
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