Polypterus senegalus (gray bichir): 120516517
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Entry
120516517 CDS
T08668
Symbol
pex6
Name
(RefSeq) peroxisome assembly factor 2 isoform X1
KO
K13339
peroxin-6
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120516517 (pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120516517 (pex6)
Membrane trafficking [BR:
psex04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
120516517 (pex6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_lid_3
TsaE
AAA_5
AAA_22
AAA_33
nSTAND3
AAA_7
DUF815
RuvB_N
RNA_helicase
NPHP3_N
AAA_14
PEX6_4th
Mg_chelatase
TIP49
AAA_17
AAA_28
Vps4_C
AAA_24
AAA_25
IstB_IS21
Parvo_NS1
KAP_NTPase
Dppa2_A
T2SSE
PhoH
Motif
Other DBs
NCBI-GeneID:
120516517
NCBI-ProteinID:
XP_039594171
LinkDB
All DBs
Position
16:complement(85965832..86045075)
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AA seq
1089 aa
AA seq
DB search
MAAQGELQVLEPFPSQHHPLNVLLLQSQARQILACSGDTTCVVLSARSRQAADRRALFLC
AHLSSEEDLPDSQVQLHGDTLLKVYTSRLFYRHYGFQSRERVEVRLVQPLALSKVVLGAR
SRQCLKWASSEKFANGLLILASCQKQSLLARQGDVLAVPYHPLFGEDVAQVHHHLLDLVV
LESVPVQQGVITVKTSVVVADFREVSVGAANHDGQHHGQRLLQSLYVSDFAHYVNSLASG
GSLLDSRRHLTWSFSSFLQALECRFEVRVADVDSLLVLGKIKPKDQRETPKDPDACLFVS
KSSLLKLGLFNNEWVTVSMLSEKVKTASKSERLRDLERSDDKGECEEAGRSRSGHLALLV
VGEFTDLPDSVGLVSPSLWFNLSKGAPVPNANKVVKIKRCYEHHLHTAKQEKESRSCTSA
PSMAKELYVEIITSPTYSTTAIFDNILYEYFRTPRLVQQGDVLRVNTEGQAEYLEGLTTG
FMRWPVLYFKVKKVHGHNEDARPNSWGYLADTTRTSLYLIGTASSYVPCSFMGNEPTFWN
NLSPPGLVHSIEQLISTIQPYTVEGSTASLDRPCTVLLKGHCGSGKTTAVKAACSRLNLH
LLKVDCVTLCAETTAASVVKLQYAFNQADLHKPCVVLLRNLQLLGRHRDGRSEDCRVTSV
LKQLLTDPPKQNSFPVVVVGTVSKPEELFPDVIMSFVHEVAIESPSEEQRKAMLMSLTAG
MPLGKDVSLCKIAKQTAGFFLGDLCALLAYSSKTAYKRVFSACFPCETSLEEEKMLCDSG
ITIIAEDFLKSLEQLNKVHSKAIGAPKIPAVKWHDIGGLHSVKKEILDTVQLPLDHPELV
SLGLRRSGLLLYGPPGTGKTLLAKAVATECAMTFLSVKGPELINMYVGQSEENIRDVFAK
ARAASPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHSSADVFVIGATNRP
DLLDQSLLRPGRFDKLLYVGINEDKESQLQVLKAIASRFKMDPSVCLHDVIERCPPQLTG
ADLYALCSDAMMSALKQKIKRIEEGLETEESDLILRREDFQCALEKLQPSVSEQELLKYK
LIQQKFTAN
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcagggggagttgcaagttttggaaccctttccttcgcagcatcatccactg
aacgttctcctcttgcagtcacaggccagacaaatcctggcatgctcgggcgatacgacg
tgcgtagtgctgtccgctcgaagtcgccaggcagcggacaggcgggcgttgttcctgtgt
gctcatttgagctccgaggaagacttgccggatagccaagtgcagctccacggggatacg
cttctcaaggtgtacaccagcaggctcttctacagacactatgggtttcagtcacgagag
agagtggaggtgcggttggttcagcccctcgctctcagcaaggtggtcctgggagcgcgc
agcaggcagtgtctcaagtgggcgtcctccgagaagtttgccaacggactactcattttg
gcgtcgtgtcaaaagcagagcctcttggcccgacaaggagatgtactggctgtgccttac
catccgctctttggtgaggatgtcgcgcaggtgcatcaccaccttttggacctggtggtt
ttggagagcgtaccagtgcagcagggagtcatcacagtcaaaacgagtgttgtggtggct
gacttcagggaagtcagcgtgggggcggcgaaccacgatggccagcaccatggccagaga
ctactgcaatcgctctacgtgtcggacttcgcccactatgtcaatagtcttgccagcggt
gggtcgctgctggacagtaggagacacttgacttggagtttctccagtttccttcaagcg
ctcgagtgcaggtttgaggtgcgggtagcagatgtggattccctcttggtgctgggcaaa
attaaaccgaaggaccagcgggaaacacccaaagatcccgatgcttgcttgttcgttagc
aaaagttcgctacttaaactgggattgtttaataacgaatgggtgacagtgtcgatgctt
tcggagaaagtcaagacggccagtaagagcgaacgcctgcgtgatctcgagaggtcggac
gacaaaggggagtgcgaggaggccgggaggagccgaagtggacacctggctttgttagtc
gtgggagagttcacggacctgcccgatagtgtcggcctcgtatccccctcactgtggttc
aatctttcaaagggtgcccctgtgcctaacgccaacaaagtggttaaaatcaagaggtgt
tatgaacaccatttgcatacagcaaaacaggaaaaggaaagtagatcgtgtacttctgct
ccatccatggcaaaagaactatatgttgaaattattacatcaccaacttacagcactact
gcaatttttgataatattctttatgaatatttccgtacgccaaggctggtccagcaggga
gatgttttacgggtgaacactgaaggacaagcagaatacctggaaggcctaacaactggt
tttatgaggtggcctgtgttatattttaaggtgaagaaagtacatggccataatgaagat
gcaagaccaaattcatggggctatttggcagacacaacacgtacctccttgtatttgatt
ggcactgcaagcagctatgttccatgttctttcatgggaaatgaaccaacattctggaat
aatctatcacctcctggacttgtgcactccattgagcagctgatctcaactatacagcct
tacacagttgaaggttccacagcttcattggacagaccatgtactgttttattaaaaggg
cattgcggaagtggaaagactacagcagtgaaggctgcttgcagcagactaaatcttcac
cttctgaaggttgactgtgtcaccctttgtgctgaaacaacagcagcttcagttgtgaag
ttacagtatgcctttaaccaggcagatcttcacaagccctgtgtcgtccttcttagaaat
ttacagctgctgggaaggcaccgtgatggacgcagtgaggactgtagggtcacctcagtt
ctaaagcaactgcttacagatccacccaagcaaaacagcttccctgttgtggtggttggc
acagtttcaaagcctgaagagctcttccctgatgtaattatgtcatttgttcatgaagtg
gcaatagagagcccaagtgaagagcaaagaaaagcaatgttgatgagtcttactgcaggc
atgccccttggaaaagatgtcagcctctgcaagattgctaagcagacagcaggttttttc
ctgggggatctttgtgccttacttgcctattcaagtaaaactgcctataaaagagtattc
agtgcttgttttccttgtgaaacaagtttagaagaggagaaaatgttatgcgacagtgga
atcaccattatagctgaggattttttgaaatcgttggaacaattgaataaagttcattca
aaagcaattggagcaccaaagattcctgctgtcaaatggcatgatataggaggccttcat
tctgttaaaaaagagattttggatactgttcagctgcctctggatcaccctgagcttgtg
tctttaggcctgaggcgttctggtttgttgctctatggaccacctggaacagggaaaacc
ctgctagctaaagcagttgccactgagtgtgccatgacgttccttagcgtaaaaggacca
gaactcattaacatgtatgtaggacagagtgaagaaaatatcagagacgtctttgccaaa
gccagggctgcatctccctgtattattttctttgatgagctggactcattggcaccaaat
agaggaaggagtggagactctggtggagtaatggacagggttgtgtcacagcttctagca
gagttagacggacttcactcttctgcagatgtgtttgtgattggagccaccaatcggcct
gatcttttagatcagtcacttctcagaccaggcagatttgataaattgttgtacgtcggc
atcaatgaagataaggagtcccagttgcaagtactgaaggcgattgctagccgattcaag
atggatccaagtgtttgccttcatgatgttattgaaagatgccctcctcagctaacagga
gcagatctgtatgctttatgttcagatgccatgatgtcagccttaaagcagaagatcaag
aggatagaagaaggtctagaaacagaagagtctgatctcatactaaggagggaagatttc
cagtgtgcattagagaagctacagccatctgtatctgaacaagagctgctgaaatacaag
ctcatccaacagaaattcacagcaaattaa
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