Polypterus senegalus (gray bichir): 120516546 Help Entry 120516546         CDS       T08668                                  Symbol msh6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism psex  Polypterus senegalus (gray bichir) Pathway psex03430   Mismatch repair Brite KEGG Orthology (KO) [BR:psex00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     120516546 (msh6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:psex03400]     120516546 (msh6) DNA repair and recombination proteins [BR:psex03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      120516546 (msh6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II Motif Other DBs NCBI-GeneID:  120516546 NCBI-ProteinID:  XP_039594227 LinkDB All DBs Position 16:41838318..41867553 Genome browser AA seq 1344 aa AA seqDB search MAKQSSIFSFFAKSPPLRSKSSKASSSSPVEADLPSVRKSNTSPKEGAKETPAKQNNGPA STSCPFSPGDLVWARLEGHPWWPCMVYNHPVSSEYLRGQGKSQRVHVHFFDDTPTRGWVS IKYVKQYNGSAASDSKPGGTFFSGKPEIRRAMSLADAAMNDDKEKRLQLAVCTDPSEDED EPEEVMEVDEQSEHSEEEKEEALKPNKRKTRLTSSGQQKAKRRRIIVESDSDQENTDDEF KPDEAEVSSEECSSGEEEVSEPETEPETDPESPIKPVKHKSKPAKKTVKDTPLVGSSPLQ TPKRSPVIAANTKSKLSAFSAPESFESQASTGTSGSSGATVWDHEKLEWLQEERRKDSKR RKSSDPDFDPTTLYVPEDFLNKCTPGMRRWWQLKSEMFDTIIFYKVGKFYELYHMDAVTG VNEMGLMFMKGSWAHSGFPEIGFGRFSDVLVQKSYKVARVEQLETPEMMEARCKTMARPT KFDKVVRRDVCRVITKGTQTYSVLDGAPSESHSKYLLCVKEKADEESSGCQRTYGVCYVD TSVGKFYIGQFEDDRHCSRFRTLVAHYPPAELLFEKNNLSTETRKLLKGCLASVIQEGLS PGSQFWEASKTLKVLAEEDYFKESTKVNGKCEGGLPPTLKGMVSESDTLGLTPKEGYELA LSAMGACVFYLKKCLVDQELLSMANFEEYIPVDVEMDKSQTSMSFFAKTRQRMVLDGVTL SNLEILQNVTTGTMEGTLLEKLDSCCTPFGKRLLKQWLCAPLCNTFSIGDRLNAVEDLMA VPDKMSEIRELLKKLPDLERLLSKIHSIGSPLKSKDHPDSQAVLYEETTYSKRKIADFLS AFEGFKVMQTIISIITPALDGFRSVLLKQIVSLREETEEGLFPSLSSELKRWDTAFDHQK ARNTGVITPKAGFDPEYDQALADIKNTEGCLQDYLEKQRKRLGCKSVVYWGTGKNRYQME IPESVTERHVPEEYEVKSTKKGYKRYWTKEIERLFGNLVSSEERRDGALKDCMRRLFYNF DKNYKEWQMAVECVAVLDVLLCLASYSQGGDGPMCRPEVVLPEDGALPFLELRGSRHPCI TKTFFGDDFIPNDIFIGCRGDDECEKEEEQASCVLVTGPNMGGKSTLMRQCGLLVILAQL GCYVPAESFRLSPVDRVFTRLGASDRIMAGESTFFVELSETASILHHGSQHSLVLIDELG RGTATYDGTAIASAVVRELAEHIQCRTLFSTHYHSLVEDYSHYPAVRLGHMACMVENECE DPSQETITFLYKFIRGACPKSYGFNAARLASIPEEVIQMGHKKAKEFERSTVSLRVFKKL CLLLEDPKAEVERIISLVKLVHKL NT seq 4035 nt NT seq  +upstreamnt  +downstreamnt atggccaagcaaagcagcatcttcagctttttcgctaaatctcccccattaaggagtaag tcgagtaaagctagcagctcatctccggttgaagcggatcttccatctgtgcgcaagtct aacacttcgccaaaagaaggggcgaaggagacgccggctaagcagaacaacggccccgcg agtacatcgtgtcccttcagccctggtgatctagtatgggcacgtctagaaggacatcca tggtggccctgcatggtgtacaatcaccctgtgtcttcagagtacttaaggggtcagggg aagtcccagcgggttcatgtgcacttttttgatgacactccaacaaggggctgggtcagc atcaaatatgttaaacaatacaacggttcagctgctagtgactcaaaaccaggaggcacc ttcttcagtggaaagccagagattcgccgtgcaatgtctctggcagatgctgctatgaat gatgataaagaaaagcgtttacagttggctgtgtgcaccgatccgtcagaagatgaagat gagccagaagaggtcatggaggttgatgagcagtccgaacatagcgaagaagaaaaagag gaagcacttaagcctaataagcggaaaacaaggctcacttctagtggtcaacaaaaagca aaacggagacggattattgtagaatcggatagtgaccaggaaaatacagatgatgaattt aagccagatgaggctgaagtgagcagtgaagagtgcagtagtggcgaagaggaggtcagt gagccagaaactgaacctgagacagatccagagagccctataaaaccagttaaacacaaa tcaaaacctgcaaagaaaactgttaaagacacccctttggtgggcagtagtcctttgcag actcctaaaaggtctcctgtaatagcagcaaacaccaagtctaaactttctgccttctct gctccagaaagctttgaaagtcaagccagcactggcacatccggtagcagcggtgcaact gtctgggatcatgagaagctagaatggctgcaggaagagaggagaaaagactccaaaaga aggaagtcctctgacccagattttgaccccacaaccctgtatgttcctgaggacttcctg aacaaatgcaccccaggcatgcggagatggtggcagctgaagtctgaaatgtttgacact attatcttctataaagttggcaaattctatgaactgtatcacatggatgctgtgaccggt gtgaatgagatggggctcatgtttatgaagggctcctgggcacattctggatttccagag attggatttggacgtttctctgatgttttggttcagaagagctacaaagttgcaagggta gaacagcttgagactccagaaatgatggaagctcgatgtaaaacaatggcacgtccgacc aagtttgacaaagttgtgcggcgggatgtgtgtcgtgtgattaccaaaggtacgcagacc tacagcgttctagatggtgctccatcagagagtcacagcaaatacctattgtgtgttaag gagaaagccgatgaggagtcctctggctgccagcgtacctatggagtttgctatgtggat acatctgttggtaagttctacattggtcagtttgaagatgaccgacattgctcaagattt aggactctcgttgcacactacccaccagctgagctgctttttgaaaagaacaacttgtcg acagagacccgcaaattactaaagggctgcttggcttctgttattcaagagggtctgagt ccaggctcgcagttttgggaggcttcaaaaacgctaaaagtactggcagaagaagactac tttaaagagagcaccaaagttaatggcaagtgtgaaggtgggttgcctccaacactcaaa ggcatggtctctgagagtgacaccttaggcctcactccaaaggagggctatgagctggca ttgtctgcaatgggggcttgtgtgttttacctgaaaaaatgtcttgttgaccaagaattg ttatcgatggctaactttgaagagtatattcctgttgatgtggagatggataaaagtcag acttctatgagcttctttgctaagactcgtcagcgcatggtgctggatggtgtaacgtta agcaatctggagattctgcagaatgtaaccactgggaccatggaaggcactttgctggag aagttggacagctgttgcacaccttttggcaagcggctccttaaacagtggctttgtgct ccgttatgcaacacattttctattggtgatcgtctgaatgcggtggaagatctgatggct gtgccagacaagatgagtgagattagggagcttctgaagaagctgccagacctcgagaga cttctcagtaagatccacagcattggctcccctctaaagagcaaggaccatccagatagt caagctgtcctctatgaggagactacctacagcaaaaggaagattgcagatttcttgtct gcctttgaagggttcaaagtcatgcagacaatcatcagtatcatcactccagctctggat ggcttcagatcagtgttactgaagcagattgtcagcctcagagaagagactgaggaaggc ctctttccaagtttgtcatctgagcttaagaggtgggatactgcctttgaccaccagaaa gccagaaatactggagttataacccccaaagcaggctttgacccagaatatgaccaagcc cttgctgacatcaaaaacacagagggctgtcttcaggattacctggaaaagcagcgcaag cggcttggctgcaaatctgttgtttactggggcactggcaaaaatcgttaccagatggag atcccagaaagcgtcacagagagacacgtcccagaggaatatgaggtgaagtccacaaaa aagggctataaacgctactggacaaaagagatagagcggctttttgggaacctggtgagt tcagaggaacgcagagatggggctttgaaggactgcatgaggaggctcttttacaacttt gataagaactataaggaatggcagatggctgtcgagtgtgtagctgtcttagatgtgctc ctctgccttgccagctacagccagggaggcgacggcccaatgtgccgcccagaggtagtc ctgccagaagacggagcgctgccattccttgagctacgaggctcgcgtcacccgtgcatc acgaaaaccttctttggggatgacttcattcccaatgacattttcattggctgtagagga gatgatgagtgtgagaaagaggaagagcaggcatcttgtgtgcttgtgacaggacccaat atgggaggcaagtcgacactcatgaggcagtgcggtcttcttgtcatcttggcacagctc ggctgttatgtgcctgctgaaagttttcgtctgagccccgttgaccgggttttcaccagg ctgggggcatctgatcgaatcatggcaggtgagagcactttttttgtggagctgagtgag acggcaagcatattgcatcatggaagccagcactcgcttgtcctcattgatgagctaggt agaggcacagccacttacgatggaactgccattgccagtgccgtggtcagggagctggca gaacacattcagtgtcgcactctgttttccactcattaccactccctagtggaggactac tctcattacccagcagtgagactgggccacatggcctgtatggtagaaaatgagtgtgaa gacccaagtcaggaaaccattacattcctgtataaattcatcagaggagcctgtcctaaa agttacggattcaacgctgccaggcttgccagcattcctgaggaggtcattcagatggga cacaagaaggccaaagagtttgaaaggagcacagtgtcactaagagtgtttaagaaactc tgtctgcttctggaggatcctaaagcggaagtggagcgaatcatttcattagttaagctc gttcacaagttgtaa

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