Polypterus senegalus (gray bichir): 120516563
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Entry
120516563 CDS
T08668
Symbol
lsp1a
Name
(RefSeq) non-muscle caldesmon isoform X1
KO
K12327
caldesmon
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
120516563 (lsp1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psex04812
]
120516563 (lsp1a)
Cytoskeleton proteins [BR:
psex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
120516563 (lsp1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
120516563
NCBI-ProteinID:
XP_039594261
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Position
1:331289183..331380836
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AA seq
559 aa
AA seq
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MAEATGNQDLQESSGAGQQSDVHLLTAQRSIEDEEEVAREQRRRAREEQRSLSNYHDSSP
DGTDITSPREDNQYDDDFKPSLQSALDEDEGFSDWTQRLEQHRQQRLEDVQQDEDELLMS
SRRPWGTQEGEEQHQRMETSRRISQRAEVDGEQLEVAQGSRMRKEGARVTSEMANWSEET
GSGATREAFLQRDVQCKQSNGSAAQEEVEEHEPSSRRTLRHLSLSEEDDQEAMSEAEAKL
EKIRRSLEEKESQEYERLRQKQAEAEMELEELQKRREERRRLREEEERRRQLEELERQEK
EEEERKRMKQDIERRRKEATEKRLKNLSISSCEGEEVFCPLSPRSPTFKSEADERVTAET
TYTITERTESLNRSLKKSNSVKKMQPPVPISKIDDRKDQYTHAVETSLKEAKPDKQPLMD
IPHGTEPVSSMKSLWEGSEPGSHAGAKVTPCKETEGLKVGVADLITQWVKGNPDCSSKSS
PSKPAEIKAGDVLSKKNIWELKGDSSPSQASSVSKSTPSGKRYKFIVTGHGKYEKVPVSD
DQSMSYANGKSAGEPREDS
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggctacgggcaaccaggacctgcaagagagcagcggcgctggacagcagtca
gacgtccacctgctgaccgctcagcggagtatcgaagacgaagaggaggtggcgcgagag
cagcggcgaagggcacgagaggagcagaggagtctgagtaactaccacgactcgagcccc
gacggcacagacatcacatcccccagagaggacaaccagtatgacgacgatttcaagcct
tccctccaaagcgcactggatgaggacgaggggttcagcgactggacacaaaggctggag
cagcaccggcagcagcgtctggaggacgtccagcaggatgaggatgagctgctgatgtcg
tctcgccggccgtggggaacacaggaaggagaggagcagcaccagaggatggagacgagc
cgccggatctcccagagggcagaggtggacggcgagcagttggaagtggcgcaggggtcc
cggatgaggaaggaaggagcgagggtcacatcagagatggccaactggagtgaggagacg
ggaagcggtgcgacccgagaggccttcctgcagcgggacgtccaatgcaagcagagcaac
ggcagtgcggctcaagaggaggtggaagaacatgagcccagcagcaggaggacattgaga
cacttgagcctgtctgaagaggacgaccaagaagccatgtccgaggccgaggccaaactc
gagaagatccgccgcagcctggaagagaaggagagccaggagtacgagcgtctgcgccag
aagcaggccgaggcggagatggagctggaggagctgcagaagaggagggaggagaggcgg
cggctgcgcgaggaagaggagcggcgcaggcagctggaggagctcgagaggcaggagaag
gaggaggaagagagaaaacggatgaagcaggacatcgagagacggaggaaggaggccacc
gagaagaggctcaaaaacctgagcatctcgagttgcgagggcgaggaggtcttctgccca
ctgagccccaggagccccacgtttaagagtgaggcagatgagagggtgacagccgagacc
acctacacgattactgaacggacggagtctctgaatcggtccctgaagaaaagtaacagc
gttaagaagatgcagccccccgtgcccatctccaagatcgatgacagaaaggatcaatac
actcacgccgtggagacctccttgaaagaagccaaaccagacaaacagcccctgatggac
attccacatggcacagaacccgtgtccagcatgaagtccctgtgggaaggcagtgagcct
gggagccacgctggtgccaaagtgaccccgtgtaaggaaacagaaggtttgaaagttgga
gtcgctgacctcatcactcagtgggttaaaggaaatcctgactgcagcagcaagagctcc
ccgtcaaaacctgccgagataaaggccggtgacgtactgagcaagaagaacatctgggag
ctgaaaggcgactcttctcccagtcaggccagctctgtgtcaaagagcactccatctggc
aagaggtacaaatttatagtgaccggccatgggaaatacgagaaagtgccggtcagcgat
gaccagtccatgtcgtacgccaatgggaagtcagctggagagccgcgggaggactcgtga
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