KEGG   Polypterus senegalus (gray bichir): 120516563
Entry
120516563         CDS       T08668                                 
Symbol
lsp1a
Name
(RefSeq) non-muscle caldesmon isoform X1
  KO
K12327  caldesmon
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex04270  Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:psex00001]
 09150 Organismal Systems
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    120516563 (lsp1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:psex04812]
    120516563 (lsp1a)
Cytoskeleton proteins [BR:psex04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Others
     120516563 (lsp1a)
SSDB
Motif
Pfam: Caldesmon
Other DBs
NCBI-GeneID: 120516563
NCBI-ProteinID: XP_039594261
LinkDB
Position
1:331289183..331380836
AA seq 559 aa
MAEATGNQDLQESSGAGQQSDVHLLTAQRSIEDEEEVAREQRRRAREEQRSLSNYHDSSP
DGTDITSPREDNQYDDDFKPSLQSALDEDEGFSDWTQRLEQHRQQRLEDVQQDEDELLMS
SRRPWGTQEGEEQHQRMETSRRISQRAEVDGEQLEVAQGSRMRKEGARVTSEMANWSEET
GSGATREAFLQRDVQCKQSNGSAAQEEVEEHEPSSRRTLRHLSLSEEDDQEAMSEAEAKL
EKIRRSLEEKESQEYERLRQKQAEAEMELEELQKRREERRRLREEEERRRQLEELERQEK
EEEERKRMKQDIERRRKEATEKRLKNLSISSCEGEEVFCPLSPRSPTFKSEADERVTAET
TYTITERTESLNRSLKKSNSVKKMQPPVPISKIDDRKDQYTHAVETSLKEAKPDKQPLMD
IPHGTEPVSSMKSLWEGSEPGSHAGAKVTPCKETEGLKVGVADLITQWVKGNPDCSSKSS
PSKPAEIKAGDVLSKKNIWELKGDSSPSQASSVSKSTPSGKRYKFIVTGHGKYEKVPVSD
DQSMSYANGKSAGEPREDS
NT seq 1680 nt   +upstreamnt  +downstreamnt
atggcagaggctacgggcaaccaggacctgcaagagagcagcggcgctggacagcagtca
gacgtccacctgctgaccgctcagcggagtatcgaagacgaagaggaggtggcgcgagag
cagcggcgaagggcacgagaggagcagaggagtctgagtaactaccacgactcgagcccc
gacggcacagacatcacatcccccagagaggacaaccagtatgacgacgatttcaagcct
tccctccaaagcgcactggatgaggacgaggggttcagcgactggacacaaaggctggag
cagcaccggcagcagcgtctggaggacgtccagcaggatgaggatgagctgctgatgtcg
tctcgccggccgtggggaacacaggaaggagaggagcagcaccagaggatggagacgagc
cgccggatctcccagagggcagaggtggacggcgagcagttggaagtggcgcaggggtcc
cggatgaggaaggaaggagcgagggtcacatcagagatggccaactggagtgaggagacg
ggaagcggtgcgacccgagaggccttcctgcagcgggacgtccaatgcaagcagagcaac
ggcagtgcggctcaagaggaggtggaagaacatgagcccagcagcaggaggacattgaga
cacttgagcctgtctgaagaggacgaccaagaagccatgtccgaggccgaggccaaactc
gagaagatccgccgcagcctggaagagaaggagagccaggagtacgagcgtctgcgccag
aagcaggccgaggcggagatggagctggaggagctgcagaagaggagggaggagaggcgg
cggctgcgcgaggaagaggagcggcgcaggcagctggaggagctcgagaggcaggagaag
gaggaggaagagagaaaacggatgaagcaggacatcgagagacggaggaaggaggccacc
gagaagaggctcaaaaacctgagcatctcgagttgcgagggcgaggaggtcttctgccca
ctgagccccaggagccccacgtttaagagtgaggcagatgagagggtgacagccgagacc
acctacacgattactgaacggacggagtctctgaatcggtccctgaagaaaagtaacagc
gttaagaagatgcagccccccgtgcccatctccaagatcgatgacagaaaggatcaatac
actcacgccgtggagacctccttgaaagaagccaaaccagacaaacagcccctgatggac
attccacatggcacagaacccgtgtccagcatgaagtccctgtgggaaggcagtgagcct
gggagccacgctggtgccaaagtgaccccgtgtaaggaaacagaaggtttgaaagttgga
gtcgctgacctcatcactcagtgggttaaaggaaatcctgactgcagcagcaagagctcc
ccgtcaaaacctgccgagataaaggccggtgacgtactgagcaagaagaacatctgggag
ctgaaaggcgactcttctcccagtcaggccagctctgtgtcaaagagcactccatctggc
aagaggtacaaatttatagtgaccggccatgggaaatacgagaaagtgccggtcagcgat
gaccagtccatgtcgtacgccaatgggaagtcagctggagagccgcgggaggactcgtga

DBGET integrated database retrieval system