Polypterus senegalus (gray bichir): 120516672
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Entry
120516672 CDS
T08668
Symbol
six2a
Name
(RefSeq) homeobox protein SIX2a isoform X1
KO
K19472
homeobox protein SIX2
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120516672 (six2a)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
120516672 (six2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
DUF4820
YdaS_toxin
HTH_TSHZ3
Phage_mat-A
HTH_72
Motif
Other DBs
NCBI-GeneID:
120516672
NCBI-ProteinID:
XP_039594458
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Position
16:88006431..88010399
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AA seq
289 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERYEENNENSNSNSHNPLTSSMNGNKTVLGSSDDEKTPSGTPDHTSPSPALLLTT
NSGLQTLHGLAPPQGPSAIPVPTSDPMHPHTLHEAILNPMSSNLVDLGS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgcttcctacgtttggctttacgcaggagcaagttgcttgcgtctgtgaggta
ctacagcaaggggggaacattgaacgtctcggccgtttcctttggtcactgcctgcttgc
gaacatcttcacaaaaacgagagtgtccttaaagcaaaagcagtagtagcctttcacaga
ggcaatttccgcgagttgtacaagatactggaaagccaccagttctccccgcacaatcac
ccaaagcttcagcaactgtggttaaaggcacattacatcgaagcagagaaactacgcggt
cgccctttgggggctgtaggcaagtacagggtgcgaagaaagttccctttaccccggtcc
atatgggacggcgaggagaccagctactgttttaaggagaaaagccgcagcgtcctgaga
gaatggtacacccataacccctatccgtccccgcgcgagaaaagagagctagccgaggcc
actggcctcaccaccacccaggtcagcaactggttcaagaacaggcggcagagagaccgg
gcagccgaagccaaggaaaggtacgaggaaaataacgagaactcaaactccaacagtcac
aacccattgacttcttccatgaatggaaataaaactgttttggggagctcggacgacgag
aagactccttcgggaactccggatcacacctcgccaagtccggctttgctcctgacgacg
aactctggactacagactctgcacggcctagcgcccccccaaggtcctagtgccatcccg
gttcccacctcagatcccatgcacccccacactttgcacgaggccatccttaacccgatg
tcgtccaacttagtcgacttgggctcctaa
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