Polypterus senegalus (gray bichir): 120516753
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Entry
120516753 CDS
T08668
Symbol
eef1a1a
Name
(RefSeq) elongation factor 1-alpha 1a
KO
K03231
elongation factor 1-alpha
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120516753 (eef1a1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120516753 (eef1a1a)
03016 Transfer RNA biogenesis [BR:
psex03016
]
120516753 (eef1a1a)
03012 Translation factors [BR:
psex03012
]
120516753 (eef1a1a)
04131 Membrane trafficking [BR:
psex04131
]
120516753 (eef1a1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psex04147
]
120516753 (eef1a1a)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120516753 (eef1a1a)
Transfer RNA biogenesis [BR:
psex03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
120516753 (eef1a1a)
Translation factors [BR:
psex03012
]
Eukaryotic type
Elongation factors
120516753 (eef1a1a)
Membrane trafficking [BR:
psex04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
120516753 (eef1a1a)
Exosome [BR:
psex04147
]
Exosomal proteins
Proteins found in most exosomes
120516753 (eef1a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
120516753
NCBI-ProteinID:
XP_039594596
LinkDB
All DBs
Position
16:24313376..24329797
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSRYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEPSTNMTWFKGWKINRKDGNIAGTTLLEALDAIQPPTR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALS
EALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAANFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVDMIPGKPMCVESFSDYPP
LGRFAVRDMRQTVAVGVIKAVEKKPPTSGKVTKSAQKAQKAK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaaaagactcacatcaacattgtagtcattggacatgttgactctggcaag
tccacaactactggccacctgatctacaaatgtggtggaatcgacaagagaaccattgaa
aagtttgagaaggaagctgctgagatgggtaagggttcctttaagtacgcctgggttttg
gacaaactgaaagcagagcgtgaacgtggtattacaattgatatatccctttggaaattt
gagaccagcaggtactatgttactattattgatgctcctggacacagagatttcattaag
aacatgattactggcacttctcaggctgactgtgctgtccttattgttgctgctggtgtg
ggagaatttgaagctggaatttcaaagaatgggcagactcgtgaacatgccttgctagcc
tacactcttggtgtgaagcagctgatagtgggtgttaacaagatggactccacagaacca
ccatacagccaaaagagatatgaagaaatcgtgaaggaagtcagcacatacataaagaag
attggttacaacccagacacagtggcctttgtgccaatctctggctggaatggtgacaac
atgttggaacccagcacaaatatgacctggttcaaaggttggaagataaatcgcaaagat
ggaaatattgcaggaacaactcttttggaagccttagatgctatccagccacctacacgt
ccaactgataaacccctgcgcttgccacttcaggatgtctacaaaattggaggtattggc
actgtgcctgtgggccgtgtagaaactggcgttttgaagccagggatggtggtgaccttt
gctccagttaatgtcaccacagaagtgaagtctgtggagatgcaccatgaggcgttgtct
gaagctcttcctggagacaatgtgggcttcaatgtaaagaatgtatctgtaaaggatatt
cgccgtggaaatgttgctggtgacagtaaaaatgacccacccatggaagctgcaaatttc
actgcacaggtcatcatccttaaccaccctggacagattagtgctggctatgcccctgta
ctggattgccacactgctcacattgcctgtaaatttgctgaactgaaggaaaagattgat
cgccgttcaggaaagaaattggaagataatcccaagtctttaaagtctggtgatgcggct
atcgttgacatgatacctggcaagcctatgtgtgttgaaagtttttctgactatccccct
ctgggtcgctttgctgtgcgtgacatgaggcagactgtggctgttggagtcataaaggct
gttgaaaagaagcctcctacttcagggaaagtcaccaaatctgctcaaaaggctcagaaa
gcaaaatga
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