Polypterus senegalus (gray bichir): 120516795
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Entry
120516795 CDS
T08668
Name
(RefSeq) vacuolar protein 8-like
KO
K08332
vacuolar protein 8
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120516795
03029 Mitochondrial biogenesis [BR:
psex03029
]
120516795
Membrane trafficking [BR:
psex04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
120516795
Other autophagy associated proteins
Micronucleophagy
120516795
Mitochondrial biogenesis [BR:
psex03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120516795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT_EZ
Cnd1
KAP
HEAT
Motif
Other DBs
NCBI-GeneID:
120516795
NCBI-ProteinID:
XP_039594670
LinkDB
All DBs
Position
16:96406679..96442928
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AA seq
586 aa
AA seq
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MSLCDVCSDLLKDVVALVQRASAHIVQRIRDCIASLTRCPCLKKDKENLGKDREPVLQRH
EREAAQEFLQHLDTESDQPLLNQQCLHALKTLSISENPKLQQSAAIYYLHISQQGITQLP
PKFLECYHALLQSHDLEVQKITSLSLVNLLTEEKVTKETVVQMGLLEPILELLGSGDQTV
QCNSCACVAMLATSASNREAIVSIGGILPLLVLCKSYEPRVQQNAIGAILNLTRSETTRE
VLCKEGALPLLMILLQSPDSEIQYYSCAALSNIATCSGHHMALLQVGNCFLLKTLLSLML
SSVEKICCQSCCCLRNLSVNVHTQEDMISMGCIKQLAALLQSSSKAVWESAVTLLSALSQ
HPPNRDEIVNEGILETLGKWLLQSDGNCMIVFSHISLVLKNLNDSKYLQALINSKCVNGI
IKTFTLTTCTENTEEPLLSMTKCLKELAEFEIISLHIGDLLESEQIQHLVSLAIQQESAE
VAFHAACIIRQMQAHGQVNQLLKRHTANILRYLLQFLRSQEIGLQQLAISTLCQLKEDAD
FSAAIQMSPILEQLHKVQKQTDKTQDLLRMAMLSSSKGDGEENSEL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtgtgacgtttgttcagatctgcttaaagatgtggtagccttggtgcaaaga
gcttctgctcatattgtgcagagaatacgcgattgtattgcgtctttgaccaggtgcccc
tgtttgaagaaggacaaagagaacctgggtaaggatcgtgagcccgttcttcagaggcat
gaaagagaagcagcacaggagtttcttcagcacttggacacagaaagtgaccagcctctc
cttaatcagcaatgcctccatgccctgaagacgctgtccatttcggaaaaccccaaatta
caacaatcagctgcaatttactacttgcacattagtcagcaggggattactcaattgccc
cccaaattcttggaatgttaccacgcattattgcagtcgcatgacttagaagtacaaaaa
atcacatccttgtcacttgttaatctgctcactgaagagaaggtgacaaaggaaacagta
gtgcagatggggcttctagagcccatcttagagctgcttgggtctggagaccaaactgtt
cagtgcaactcctgtgcatgtgtggctatgttggcaacttcagcctctaacagggaagcc
attgtgtctataggtggaattttaccactactagttctttgcaaatcttatgaaccacga
gtgcagcagaatgccattggtgccatactgaatctcaccagatctgagacgaccagagaa
gtcttgtgtaaagaaggagccctcccgctcctcatgattttacttcagtctcctgattct
gaaattcagtattacagctgtgccgccctcagcaacattgccacctgctctgggcaccac
atggccctgctgcaggttgggaactgctttctgcttaagactttgctgtccctcatgctg
tcctctgttgaaaagatctgctgtcagtcatgttgttgcctacgaaatttgtctgtgaat
gtgcacacccaggaggacatgatatccatgggttgtattaaacagctggcggctctgctc
caaagctccagtaaggcagtgtgggaatcggccgtcactctcctcagcgccttgtcacag
catccccccaacagggacgagattgtgaatgaaggaattctggagacactcggaaaatgg
ctgctgcaaagtgacggaaactgcatgatcgtcttcagccacatctcactggtccttaaa
aacctaaatgacagtaaatatcttcaggcattgattaacagtaagtgcgtcaacggaata
atcaagaccttcactttgactacctgtactgagaatacggaagaacccctgctttctatg
actaaatgtttaaaagaacttgcagaatttgaaattatatcattgcatattggagattta
ctggaatctgaacagatacaacatctcgtaagtttggctattcaacaggagagtgcggag
gtggcctttcatgctgcgtgtatcatccgtcaaatgcaagcacatggtcaagtgaaccag
ttgctgaaacgtcacactgccaacattttaagatacctgctacagtttctgcggagccaa
gaaattggactacagcagctggcaataagcactctctgtcaactgaaagaggatgcagac
ttttctgcggccatccagatgagtcccatcctggagcagcttcataaagttcagaagcaa
actgacaaaacacaggatctgctgagaatggccatgctgtcctcaagcaaaggcgatggc
gaggaaaacagcgaactgtaa
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