Polypterus senegalus (gray bichir): 120516852
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Entry
120516852 CDS
T08668
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03008
Ribosome biogenesis in eukaryotes
psex03013
Nucleocytoplasmic transport
psex03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120516852
03008 Ribosome biogenesis in eukaryotes
120516852
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120516852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120516852
03009 Ribosome biogenesis [BR:
psex03009
]
120516852
03016 Transfer RNA biogenesis [BR:
psex03016
]
120516852
03036 Chromosome and associated proteins [BR:
psex03036
]
120516852
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
120516852
Ribosome biogenesis [BR:
psex03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
120516852
Pre-60S particles
120516852
Transfer RNA biogenesis [BR:
psex03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
120516852
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
120516852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
mTOR_dom
Hydrolase_3
BspA_v
Motif
Other DBs
NCBI-GeneID:
120516852
NCBI-ProteinID:
XP_039594751
LinkDB
All DBs
Position
16:77478817..77610766
Genome browser
AA seq
1071 aa
AA seq
DB search
MPAIMTMLADHAARQLLDFSQKLDINLLDSVVNCLYHGEGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDAANV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMMQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLSLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTTASPLLSGTQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEE
YPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKINA
SLNPANPVNNQIFTQEYVANLLKSAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEEREASLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaattatgacaatgttagcagaccatgcagctcgtcagctgctggactttagc
cagaaactggatatcaacttgttggacagtgtggtgaattgcttgtatcatggtgaaggc
ccacagcaacgaatggcccaagaggtgttaactcatttgaaagaacatccagatgcttgg
acaagagttgatacaattctggaattttcccaaaatatgaacaccaaatattatgcactg
cagattttggaaactgttattaaaaccagatggaagattcttcccagaaaccagtgtgaa
ggaatcaagaagtatgtggttgggctcattattaaaacttcttctgatgcagcaaatgtt
gagaaagaaaaagtatatattggaaaactgaacatgattcttgtgcagattcttaaacaa
gaatggcctaaacattggccaacctttataagtgacatcgttggagcaagtaggaccagt
gaaagtctctgtcagaacaacatgatcattctgaagttgttaagtgaagaagtttttgat
ttctctagtggtcagatgactcaagtgaaagcaaagcatttaaaagacagcatgtgtaat
gaattttcacaaatattccagttatgccagtttgtaatggagaactctcagaatgcccct
cttgttcatgcaactctagaaacattactaagattcctaaattggattccgcttggctat
atatttgaaacaaaactgatcagtacacttgtatataagttcttaaatgtacctatgttc
agaaatgtcactttgaagtgtctgactgagattgctggtgtgagtgtcagtcagtatgaa
gaacagtttgttactctcttcaccttgacaatgatgcagctaaaacagatgcttcccctt
aatactaatatccgacttgcttactcaaatggaaaggatgatgagcaaaattttattcaa
aacctcagtttatttctatgtacatttttaaaagaacatggtcaactcatagaaaaaaga
ttaagtcttcgagagacactgatggaagctcttcattacatgctgttggtctctgaagta
gaagaaactgaaatatttaagatttgtctggaatactggaatcatttggcagcagagctc
tatagggagagtccattttcaacaacggcctcaccattgctgtctggaactcaacatttt
gatgtaccaccaagaaggcaactatatttaccagtactgtctaaagtgcgtctgcttatg
gtaagtcgaatggccaaaccagaagaagtattagttgttgaaaatgaccaaggagaggtt
gtaagagagtttatgaaggatacagattcaatcaacttgtataagaacatgagggaaacg
cttgtatacctgacacatttggactatgcagatacagaacgtattatgacagaaaagctg
cataaccaggtgaatggtacagagtggtcttggaaaaatctgaatactctctgttgggct
attggctcaataagtggagcgatgcatgaagaggatgaaaagaggttccttgttacagtt
ataaaggatcttttgggactgtgtgagcagaagagagggaaagacaacaaagcaattatt
gcttcaaatataatgtatattgtaggtcaatatccaaggtttcttagagcgcactggaag
tttcttaaaacagtagtcaacaagctctttgaatttatgcatgagacccacgatggtgtt
caggatatggcttgtgatacatttattaaaattgcccagaaatgtcgtagacactttgtg
caggtacaagtgggagaagtgatgcctttcattgatgaaattttgaataacatcaacaca
atcatatgtgatcttcagccacagcaagttcatacattctatgaagctgttggttatatg
attggtgcacagactgaccaagctgtacaggaacacttgatagaaaaatacatgcttcta
cctaatcaagtatgggacagcattatacagcaagcaacaaaaaatgtggatattctgaaa
gacccagaaacagtgaagcagcttggaagtatcctcaaaacgaatgtccgggcatgtaaa
gctgttggacatccttttgtaattcagcttggccggatctacttggatatgcttaatgta
tacaagtgcctcagtgaaaatatttcagctgctattcagacaaatggtgaaatggttacc
aagcaaccattaataagaagtatgcgaacagtaaaaagagaaactctgaaactgatatct
ggatgggtgagcaggtctaatgatcctcaaatggttgcagaaaattttgtgccaccactt
ttagatgctgtgcttattgattatcagaggaatgtaccagcagccagagaaccagaagtg
ctcagtactatggccacaattgtgaacaagttaggtggtcatattacagctgaaattcca
cagatatttgacgcagtctttgaatgcactttaaatatgattaacaaggatttcgaggaa
tatccagagcatcgaacaaatttctttttattgttacaagctgtcaattcacactgtttc
ccggcattcctggctattcctcctgcacagtttaagttggttttggattctataatctgg
gcattcaaacacacaatgaggaatgttgctgacactggtctacagatactttatacctta
cttcagaatgttgctcaggaggaggctgctgctcagagcttctaccagacttatttctgt
gacatccttcagcatatcttctctgtagtaacggatacctcccatacggctggtctaaca
atgcatgcgtcaattcttgcttacatgtttaacttggtagaagaaggtaaaattaacgcc
agcctgaatccagcaaatccagttaacaaccagatatttactcaggaatatgtggccaac
cttttgaaatctgccttcccacatttgcaagatgcgcaagttaaagtttttgtaacagga
ttattcagcttaaatcaagacatacctgctttcaaagagcatttaagggactttcttgtg
caaattaaggagtttgctggtgaagacacatctgacctcttcttggaagaaagagaagct
tccctacgacaagcgcaggaagaaaaacacaagttacagatgtctgtgcctggaatatta
aatccacacgaaattccagaagaaatgtgtgattga
DBGET
integrated database retrieval system
