Polypterus senegalus (gray bichir): 120516881
Help
Entry
120516881 CDS
T08668
Symbol
copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120516881 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psex04147
]
120516881 (copb1)
Membrane trafficking [BR:
psex04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
120516881 (copb1)
Exosome [BR:
psex04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120516881 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT_2
HEAT
Cnd1
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
120516881
NCBI-ProteinID:
XP_039594808
LinkDB
All DBs
Position
1:334955810..335018669
Genome browser
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVPMDSEPPSEISLKTDLEKGDVKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFENLIPDAPELIHDF
LVNEKDSSCKRNAFMMLIHADQDRALDYLSTCIDQVHAFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADV
LDFVREAIQRFDHLRPLIIEKMLEVFHAVKAVKIYRGAVWILGEYCCTKEDIQSVMTEVR
RSLGEIPIVENEIKKETGEVKPEEEVTVAPAQKLVTEMGTYATQSALSSSRPTKKEEDRP
PLRGFLMDGDFFVAASLATTLTKVALRYVSIVQEKRKQNSFVSEAMLIMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRRSLSHMLSAKLEEEKLSQKKESEK
RNVTVQADDPISFMQLTAKNEMTSKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNIADLNDYLHHILKSTNMKCLTPEKALSGFCGFMAANLYARSI
FGEDALANVSIEKPIHLGPDAPVTGHIRIRAKSQGMALSLGDKINLSQKKSNA
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagcggaaaatgtttgttataccttaataaacgtcccaatggactctgagcca
ccctcggaaataagtctgaaaacggatctagaaaagggtgatgttaaggcaaaaacagag
gctctgaagaaggtgataataatgatcctcaatggagaaaagctgccaggactactgatg
acgatcatacgctttgtgctaccgcttcaggaccatacaattaaaaaacttctgctggtc
ttctgggaaattgtacccaagaccactcctgatggcaaactgttgcaggagatgatcttg
gtgtgtgatgcatacagaaaggacttacaacatcccaatgagttcattcgtgggtcaaca
ctgagatttctttgcaagctgaaagagtctgagctccttgagcccttaatgccagctatc
cgtgcatgtctggaacatcgacacagctatgttcgcagaaatgctgtccttgcaatttac
acaatttacaggaatttcgaaaacttaattcctgatgctcctgagctgattcatgatttt
cttgtgaatgagaaagattcgagttgcaagcggaatgcatttatgatgttgattcatgct
gatcaggacagagcactggactaccttagcacatgtattgaccaggtccatgcgtttgga
gacattcttcagttagttattgtagaattgatctataaggtctgccatgccaatccttca
gaaagagctcggttcatacgctgtatctataatctcttacaatcatcgagtcctgctgtt
aaatatgaagcagctggaactttagtgactctctccagtgccccaactgctatcaaggcc
gctgcccagtgttacattgacttgattataaaggaaagcgataataatgtgaagctgatt
gttcttgatcgtctgattgaattaaaggagcatcccacacatgaaagagtgctacaggac
ctggtcatggatattcttcgagtccttagcacaccagatttagaagtccgtaagaaaact
ctgcagcttgcccttgatcttgtttcatcacgcaatgttgaagagctggtcattgttctc
aagaaggaggttattaaaacaaataatgtgactgaacatgaagacaccgacaagtacagg
caactacttgtccgcacgttacactcctgtagtgtccgctttccagatatggcagcaaat
gttattcctgtgctaatggagttcctgagtgacaacaatgaggccgcagcagctgatgtt
ttagattttgtgcgcgaggctattcagaggtttgatcatctcaggccactcatcattgag
aaaatgctggaagtcttccatgcagttaaagctgtaaagatttatagaggagctgtgtgg
atcttgggagagtactgttgtacgaaagaggacattcagagtgtaatgacagaagttcgt
cgttccttaggggagatcccaatagtggaaaatgagataaagaaggaaactggtgaagta
aaacctgaagaagaggtgacggtagcacctgcacagaaactggttactgaaatgggaaca
tatgcaacacagagtgccctaagcagctccagaccaactaaaaaagaggaagacaggcct
ccacttcggggatttctgatggacggagatttttttgtcgcagcttcattggctacaact
cttacaaaggtggcccttcgctatgtgtccattgtgcaagagaaaaggaagcaaaattct
tttgtttctgaagctatgctgatcatggctacaatcctgcatcttggaaagtcctccctt
cctaagaagccaatcactgatgacgatgtggatcgcatctccctttgtctcaaagtttta
tcagaatgctctcctctgatgaatgacatcttcaacaaagaatgccgtagatctctttct
catatgctgtccgcaaaactggaagaggaaaagctgtctcagaagaaagagtccgaaaag
agaaatgttacagtacaagccgacgaccccatctctttcatgcagctcacagccaaaaat
gaaatgacgtcaaaggaagatcagttccagctaagtttgctcgcagccatgggaaacaca
cagaggaaagaggcagctgaccctcttgcttctaaactgaataaggtcactcagctgaca
gggttttctgatccagtttacgctgaagcatacgtccatgttaatcagtatgacattgtg
ttggacgtgcttgtcgtcaatcagaccagtgataccctgcagaactgcaccctggaattg
gcaacactgggagatttgaagcttgtggagaaaccatcaccactcacattagcaccgcat
gattttgcaaacataaaggcaaacgtgaaagtagcttctactgaaaatggaatcatcttt
ggaaacattgtatatgatgtgtctggagcagccagcgacagaaattgtgtagttttgagt
gatatccacatagacatcatggactacattcagccggcgtcgtgtaccgatgctgaattc
cgtcagatgtgggcagagtttgaatgggaaaataaggtgactgttaatacaaacatagcg
gacctgaatgactatttacatcatattttgaaatcgaccaacatgaagtgcctcacacca
gagaaggctctctccgggttttgcgggtttatggctgctaatctgtatgcccgttctata
tttggagaagacgcccttgctaacgtgagcatcgagaagccaatccaccttgggccagat
gctccagtcactggtcacattcgcatccgagcaaagagtcaggggatggccctgagcctt
ggagacaaaatcaacctgtcgcagaagaaatcaaatgcctaa
DBGET
integrated database retrieval system
