Polypterus senegalus (gray bichir): 120516910
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Entry
120516910 CDS
T08668
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04517
IgSF CAM signaling
psex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120516910 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120516910 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psex04812
]
120516910 (sptbn1)
Cytoskeleton proteins [BR:
psex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120516910 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
120516910 (sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
120516910
NCBI-ProteinID:
XP_039594855
LinkDB
All DBs
Position
16:complement(83262538..83524856)
Genome browser
AA seq
2354 aa
AA seq
DB search
MTSVAAEYEHMEIQQPYSEVNNRWDADDWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSCRISDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALLL
WCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLA
EQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGYDLQAVEAATKKHEAIETDIAAYEERVQAV
VAVARELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKVFQEMLYIM
DWMDEMKMLLLSQDYGKHLLGVEDLLQKHTLVEADIGIQADRVKAVNASAQKFAHDGEGY
KPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQIL
SSEDYGKDLTSVVRLLSKHKAFEDEMSGRCGHMQQTIKEGEEMVAEDHFGSDKIKDRIKD
IQEQWANLEQLSAFRKKRLEEAYNLHQFQADADDIDTWMLDILRIVSSSDVGHDEYSTQS
LVRKHKDVAEEIGNYRPVIDSLHDQAKSLPEEQSQSSDVQGRLSGIEERYKEVVELTRLR
KQALQDALALYKMFSEADACELWIDEKEQWLNNMHIPEKLEDLEVIQHRFESLEPEMNNQ
ASRVAVVNQIARQLIHSGHPNEKEIKAQQDKLNTRWSQFRDLVDRKKDSLNSALGVQNYH
LECNETKTWIREKTKVIESTQELGNDLAGVMALQRKLTGMERDLAAIEDKLGDLQKEAER
LAAEHPDQAQAIMGRLAEITDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRT
QTAIASEDMPNTLAEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQSLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTELPTSL
EAAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKNR
EAASELLMKLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELQSNKEWLEKIEKDGMQLVSEKPETEVVVKEKLSALRTMWDDLESTTQTKAQCLFDANK
AELFTQSCADLDKWLEGLEGQIQSDDYGKDLTSVNILLKKQQMLENQVEVRKKEVEELQS
QAQALRQEGKGTDEVDGRRQVVEQKFGEMLEPLQKRKHNLMASREIHQFNRDVEDEILWV
EERMAVATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNILNDNPNTEGI
RQRLADLQQLWDLMIEETAKRHNRLEESHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKD
EQSAVAMLKKHQILEQAVEDYAETVHQLSKTSRALVAAGHPESERISMRQSQVDKLYAGL
KDLSEERRGKLDERYRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREF
ARDTGNIGQERVDAVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAA
SYELHKFYHDAKEILGRILDKHKKLPEELGRDQNTVEALQRMHTAFEHDIQALGTQVRQL
QEDAARLQAAYAGDKAEDIQKRENEVLETWKALLDSCEARRVRLLDTGDKFRFFSMVRDL
MLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHY
ASEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSSR
EMGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERRRQPPSP
EPLPQPAEDSESPQQWDGKEGEQISQNGLPSDQESPRGIDTVNASENVNGVAEQRTSSKE
PSPIPSPTSDRKVKQAATLPAKSQDSPSAPIEGFLHRKHEFEGHNKKASSRSWHNVYCVI
NNSEMGFYKDAKNASQGIPYHAEIPVSLKEAVCEVAVDYKKKKHVFKLRMTDGNEYLFQA
KDDEEMNTWIQAISLAITADKSEVSPSSHSTPASSRAQTLPASITVTSDSSPGKREKDKE
KDKEKRFSLFGKKK
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atgacatcggttgccgctgagtacgaacacatggagatccaacagccttacagtgaagtg
aataaccgctgggatgcagatgattgggataatgaaaacagctctgccaggctgtttgag
cgctcccgcataaaggccttagctgatgaacgagaagctgtacaaaagaagacattcaca
aaatgggtcaactctcatctggcgcgtgtctcctgtcgcatctcagacctgtatatggac
ctacgtgatggtcgaatgcttatcaagctactcgaagtgctctctggagagaggcttcca
aagccaacaaagggaagaatgcgtatccactgcctggagaatgtcgacaaggccctccaa
ttcctgaaagaacagagggtgcatttagaaaatatgggatcacatgatattgttgatgga
aaccacagattgacactggggcttatttggaccatcattctccgattccagattcaagac
atcagtgttgagactgaagacaataaggaaaagaagtctgctaaggatgccttgcttttg
tggtgccagatgaagactgctggatatcccaatgtcaacattcacaattttacaactagc
tggagagatggaatggcattcaatgcacttatccacaaacacaggcctgacctaattgac
tttgataagctgaagaaatccaacgcacactacaatctacagaatgccttcaaccttgct
gaacagcatcttgggcttacaaaactacttgatccagaagatatcagtgtggaccatcct
gatgagaaatccattattacatatgttgtaacttactaccactacttttcaaagatgaag
gctttagctgttgaagggaagcgcattggaaaggttcttgacaatgcaattgagacagaa
aagatgatagaaaaatatgagtccttggcctctgatctcctggagtggattgagcagaca
attatcattctgaataatcgtaagtttgccaactccctggttggtgtgcaacaacagcta
caggccttcaacacataccgtactgtggaaaaaccaccaaagtttacagagaagggtaat
ttagaagtgttgctttttaccattcagagcaagatgagagccaacaaccagaaagtatat
atgcccagagaaggaaaactcatctcagatattaacaaagcttgggaaagactggaaaaa
gctgaacacgaacgtgaattggcactgaggacagagttgataaggcaagagaaactggaa
cagttagctcgtcgatttgaccgtaaagcagctatgagggagacctggctcagtgagaat
caacgtctggtttcacaggacaactttggctatgatttgcaagcagtggaagctgctacc
aagaagcatgaagccattgagactgatattgctgcttatgaagaaagagtgcaagcagta
gtagctgtagccagggaactggaaactgagaactatcatgatatcaagcgcattacagcc
aggaaagacaatgttattcggctgtgggagtatctgctggagctgcttagagcacgtcgc
cagagattagagatgaatctaggactgcaaaaggtattccaggaaatgctgtacataatg
gattggatggatgaaatgaagatgctcctcctttctcaagactatggaaagcacttgctt
ggtgtggaagatctactgcaaaaacacacactagtggaggcagatattggcattcaggct
gacagggtgaaggctgtcaacgcatctgctcaaaagtttgcacatgatggagaaggttac
aagccatgtgatcctcaggttattcgtgaccgggttgcccacatggagttttgttaccaa
gagctatgccagctggcagcagaacgtcgtgctcgtctggaagagtcgcgccgtctttgg
aagttcttttgggagatggcagaggaggagggatggataagggaaaaagaacagatcctg
tcatccgaagactatggcaaagacttgacaagtgttgtacgcttactaagcaaacacaaa
gcttttgaagatgaaatgagtggacgctgtggtcacatgcaacaaacgataaaagaagga
gaggagatggttgctgaggatcactttggatctgataagatcaaggatagaattaaagac
attcaagagcagtgggccaaccttgagcagctctctgcctttaggaagaaacgcctggag
gaagcatacaacctgcatcagtttcaggcagatgcggatgacattgacacatggatgctt
gacattcttcggatcgtttccagcagtgacgttggacatgatgagtactccactcagtca
cttgttagaaaacataaagatgtggctgaagaaattggcaactatagacccgttattgat
tcacttcatgatcaagccaaaagtctccctgaggaacagtcccagtcttcagatgttcaa
ggcaggttatctgggatagaagaacgatacaaagaagttgttgagctcactaggctgcgg
aagcaggctctgcaagatgctttggcattgtataagatgttcagtgaggctgatgcttgt
gaattatggattgatgaaaaagaacagtggctgaataacatgcatatacctgaaaagttg
gaagatctagaagtcatccagcacaggtttgaaagcctggaaccggaaatgaataaccag
gcctccagagtggcagtggttaaccagatagcacggcaattgattcacagtggacatcct
aatgagaaggaaatcaaagcccaacaagataagctcaacaccaggtggagccaatttcga
gatttggtggacaggaagaaggattcccttaattctgcactgggtgttcaaaactaccat
ctggaatgtaatgaaacgaaaacatggattcgtgagaagaccaaagttattgagtccaca
caagaactgggcaatgaccttgctggtgtcatggcactgcagaggaagttgacaggaatg
gaacgggaccttgctgccattgaagacaagcttggcgaccttcaaaaagaagcagagagg
ttggctgccgaacatccagaccaggcacaagctatcatgggacgcttagcagaaatcaca
gacgtttgggaggaaatgaaaaccacgctgaaaaaccgtgaggagtcccttggtgaggcc
agcaagctacaacagtttcttcgggacttggatgattttcagtcttggctgtcaaggaca
caaacagctattgcttctgaggacatgcctaataccttggctgaagcagagaaactgctc
acacagcatgaaaacatcaagaatgaaattaacaattatgaagaggattatcagaaaatg
cgtgacatgggtgagatggtcacccaaggacaaacggatgcccaatacatgttcttacgc
cagcgcctgcaggctttggatactgggtggaatgaactgcataagatgtgggagaacaga
cagagccttttgtctcagtcacatgcctaccagctgttcctcagagacacaaagcaagct
gaagcattcctcaataatcaggagtatgtattggcacacaccgagctgcccacctcattg
gaagctgctgaggctgccattaagaaacaggaagacttcatgaccactatggatgccaat
gaagaaaagattaatgcagttgttgaaactgggcgaagactggttagtgatggaaacatc
aattctgacaaaatccaggagaaagtggattcaattgatgacaggcaccgaaagaaccgt
gaagctgcaagtgagctgcttatgaaactcaaggataatagagacttgcaaaaatttctg
caagactgccaagagctttccctttggatcaacgagaaaatgcttacagcacaagatatg
tcatacgatgaagccagaaacctgcacagcaaatggctgaaacaccaagccttcatggcc
gaattgcagtctaacaaggaatggttagagaaaatcgagaaggatggaatgcagcttgtc
tcagaaaagccagagactgaagttgtcgtaaaggaaaaactgtcagcactccgaacaatg
tgggatgacttggaatcaaccactcaaaccaaggcccaatgtctctttgatgccaacaaa
gctgagctgttcactcagagctgtgcagaccttgataagtggttggaaggcttagaagga
cagattcagtctgatgattatggaaaggacttgaccagtgtgaacatcctattgaaaaaa
cagcagatgttggagaatcaagtagaggtgcgtaaaaaggaagtagaagagctccaaagc
caagctcaagcccttagacaggagggaaaaggcacagatgaggtggacggcagaaggcaa
gtggtcgaacaaaagtttggcgagatgctagaacctcttcagaaaagaaagcataacctc
atggcttccagagagattcaccagttcaacagggatgtggaagatgagattttgtgggtt
gaagaaagaatggcagttgcaacatctacagatcatggtcacaacttgcaaactgtacag
ctactaatcaagaaaaaccagacccttcagaaagaaattcaaggacatcagccacgtatc
gatgacatctttgagagaagccaaaatatcttaaatgataaccccaatactgaaggtatt
cgacaaaggctagccgatctgcaacagctttgggaccttatgattgaagagactgcaaaa
agacacaatcgattggaggagtcccataaggctcagcaatactactttgatgctgcagag
gctgaagcatggatgagtgagcaggagctgtacatgatgtcagaagagaaggccaaggat
gagcagagtgctgtagccatgctcaagaaacaccaaatattagagcaagcagtggaagat
tatgcagaaaccgtacatcagctttcaaaaacgagtcgggcactagtggcagctggacat
cccgagagtgagcgcatcagtatgaggcagtctcaggttgacaagctgtatgctggattg
aaagacttgtcagaagaaagaagggggaaactagatgaacgttaccgcttgttccagttg
aaccgagaagtggatgacctagagcaatggatcgcagaaagggaagtagtggcaggctct
catgagcttggtcaagactatgaacatgttacgatgctgcaggagcgttttagggagttt
gctcgtgacactggcaacattggacaagaaagagtggatgcagtcaatcatatggctgat
gagctcatcaactccggacattcagatgctgctactattgcggagtggaaggacggtctt
aatgaggcatgggcggaccttctagagctcattgacaccaggactcaaatcctggcagcc
tcctatgaactgcacaaattctatcatgatgcaaaggagatccttggacgcatactggat
aaacacaagaaactcccagaggaactaggcagggaccaaaatacagttgaagcacttcag
agaatgcatacagcctttgagcatgatatccaagcattagggacacaggtgagacagttg
caggaggatgccgcccgtctccaggctgcttatgctggagataaggcggaggatatccaa
aagagagagaatgaagtgcttgaaacatggaaagctctgctagactcttgtgaagctcgt
agagtacgtcttctggacacaggagacaagttccgctttttcagcatggttcgtgattta
atgctttggatggaggatgttattcgtctgattgaggcacaggaaaaaccaagagatgtt
tcctctgtggagctgctgatgaacaatcaccagggtataaaagctgaaattgatgcccga
aatgatagttttactacttgtattgagcttggaaagtctctcctagcgaggaagcactac
gcatcggaggagatcaaagagaagttgttacagctaacagacaagagaaaagatatgatt
gacaagtgggaggacagatgggaatggctcagactgattttggaggtacaccagttctct
cgggacgctggtgttgcagaggcttggcttttgggacaggaaccttacctgtccagcaga
gagatggggcaaagtgtggatgaagtagagaagctgattaaaagacatgaggcatttgaa
aagtctgcagcaacgtgggaagaaaggttctctgctctggagagacttacaacgctagaa
ttattggaggttcgaagacaacaagaagaggaagagaggagacggcaaccaccatctcca
gagcccctgccacagcctgcagaggactctgagtctccacaacagtgggatggaaaagaa
ggagaacagatctctcagaatggattgccgtcagaccaggaatctccacgggggatagat
acagttaatgccagtgaaaatgtgaatggagttgctgaacaaagaacaagttctaaagag
cccagtccaatcccctccccaacatcggaccgcaaagtaaaacaagcagccactctacca
gctaagtcccaagactccccttcagcgccgatagaaggattcctacatcgcaaacatgag
tttgagggacacaataaaaaggcatcaagcaggtcctggcataatgtgtactgtgtgata
aacaattcagaaatgggcttttataaagatgcgaaaaatgccagtcaaggcattccatac
cacgcagagattccagtaagcctgaaggaggcagtgtgcgaggtggcagtagattacaaa
aagaaaaaacatgtttttaagttaagaatgacagacggcaatgaatacctcttccaagcc
aaagatgatgaggaaatgaatacctggatccaggccatctcattagcaatcactgctgac
aagtccgaggtttctcccagtagccatagtactccagcctccagtcgtgcccagaccttg
ccagcctccattaccgtgacaagtgattcaagcccgggaaagagggaaaaagacaaggag
aaagataaggagaagaggttcagcctatttgggaagaagaaataa
DBGET
integrated database retrieval system
