Polypterus senegalus (gray bichir): 120516964
Help
Entry
120516964 CDS
T08668
Symbol
rims1b
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120516964 (rims1b)
Membrane trafficking [BR:
psex04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
120516964 (rims1b)
Small GTPases and associated proteins
Rab associated proteins
120516964 (rims1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
PDZ
PDZ_6
FYVE_2
Motif
Other DBs
NCBI-GeneID:
120516964
NCBI-ProteinID:
XP_039594937
LinkDB
All DBs
Position
16:complement(25193626..25442233)
Genome browser
AA seq
1316 aa
AA seq
DB search
MWVCNLCRKQQEILKQSGEWFFGRGPQPSSQDGALSDTATCGDAPREKKVRSRSQTPLST
AAGSQEALKPIVLTDRSKGQESMQQTMSSSRSRSEPPRERKKPLLTTEQNGKGGQKNERK
RTPKTVTQQTDKQNEDREDKNHNENRRSGKARLQDHQNANEESKKVEQEKQRKEEEFQTR
YRSDPNLARYPVKPHPEEQQMLIHAKVSKARHERRHSDVALANAELDKSEVPENRLAKRS
QMKGTEERKSPMENQRSYSIERTGDIQISVTKQVSNHSPPTQRCILSVQHSESKDQDWSK
KHLHLDPSSAAMIRKTKREKMESMLRNDSLSSDQSESLRPPPPKPYKTKRGNIRQMSVSS
SEEEGGSTPEYTSCEDVEIESESVSEKGDWDCFPLDPAIWHVSETSPISSHPVTWQPSKE
GDHLIGRIILSKRTTMPKESGALLGLKVVGGKITESGQLGAFITKVKKGSLADVVGHLRA
GDEVLQWNGKSLPGATKKEVYNIILESKSEPQVEIVVSRPIGDIPRIPETSHPPLESSSS
SFESQKMERPSISVISPTSPGTLRDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPAR
PDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKSSEPKWNQTFLYSHVHRRDFRERMLEITV
WDQPRIQEEESDFLGEILIELETALLDDEPHWYKLQTHDVSSLPLPQPSPYLPRRHARGE
SPCKKLQRSQRIGDSDISDYDVDDGIGVVSTAVEYRSHGRENKSTTLTVPEQQRTTHHRS
RSVSPHRGDDQGRTRSQLPCVPLQRSLDEIHQSRRSRSPTRNHDASRSPKDRRSKDMDTQ
YYAEESEFLMLPRAKRGRSAECLHTTSDLQPSLDRVRSASTNCLRPDTSFHSPERERNRC
SQSLDRRRPTSPRIYIQHASPEDDSWTVEPVVPKQETVNHLSAKPRAAQRQSRTLERCNI
QKQSKKYTATDNESLKYIKLCLVFYCFLFPVYFDTNSAFTSKMYSRQMRTSGRNMLKSTS
VSGEMYNLERNDGSQSDTAIGTVGTGGKKRRSSLSARVVAIVGLPSRRSRSTSQLSQTEA
ANKKLKSTIQRSTETGMAVEMRNRMVRQPSRESTDGSMNSYSSEGNLIFSGVRLGADSQF
SDFLDGLGPAQLVGRQTLATPAMGDIQIGMMDKKRQLEVEVIRARGLTSKPGSKSLPAPY
VKVYLLENGACIAKKKTKIARKTLDPLYQQSLLFDESPQGKVLQVIVWGDYGRMDHKCFM
GVAQILLEELDLSSMVIGWYKLFPPSSLVDPTLAPLTRRASQSSLESSTGPPCIRS
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtatgcaatttatgtcgtaaacaacaagaaattctaaaacaatcaggagagtgg
ttttttggaagaggtccacaaccatccagtcaggatggagctttaagtgatactgcaaca
tgtggtgatgcacctagagaaaagaaggtccggtcaaggtctcaaacccccttaagcact
gcagcagggtctcaggaggctcttaaacccattgtcctcactgatagaagcaaggggcag
gagagcatgcagcaaaccatgtcttcttccaggtcaaggagtgaaccaccgagggagagg
aaaaagcccttactaactacagaacagaacggaaaaggaggtcagaagaatgaaagaaaa
cgcactccaaagactgtcacacagcagactgataagcaaaatgaggacagagaagacaag
aatcataatgagaatagacgttcggggaaagctagattacaggatcatcaaaatgccaat
gaggaaagtaaaaaagttgagcaagagaaacaaagaaaagaggaagagtttcaaacacgg
taccgtagtgaccctaatttagccagatatcctgttaagcctcaccctgaagagcagcaa
atgcttattcatgcaaaagtatccaaagcacggcatgagagaaggcatagcgacgttgct
ttggcaaatgcagagttggacaagtcagaagttccagagaaccgattggcaaaaaggtct
caaatgaaagggacagaagagcgaaagtcaccaatggaaaatcaaagatcttactcaatt
gaaagaactggggatattcaaatttctgttactaaacaagtttcaaatcacagtccacct
acacaaagatgcattctttcagtccagcattctgagtcaaaggaccaggactggagtaaa
aaacatttgcatctagatccaagttctgctgctatgattcgtaaaaccaaaagggaaaaa
atggaaagcatgttgaggaatgattctcttagttcggaccagtctgaatcactgaggcct
cccccacccaagccttacaaaactaaaaggggcaatataaggcagatgtcagtcagtagt
tcagaagaggaaggtggatcgacacctgagtacacaagctgtgaagatgtagaaattgaa
agtgaaagtgtcagtgaaaaaggtgattgggactgtttccctttggaccctgccatctgg
catgtaagtgagacttcaccaatcagttcgcatcctgttacctggcaaccatccaaagaa
ggtgatcatttaattggtcgaattattctaagcaagaggacaactatgccaaaagaatca
ggagcactgctaggattaaaagttgtcgggggaaaaattacagaaagtggacaacttggt
gccttcatcactaaagttaagaaaggaagtttagcagatgttgtaggccatttaagagca
ggtgatgaggtgctgcagtggaatggcaagtcattacctggtgcaacaaaaaaagaagtt
tacaatataattttggagtccaagtctgagcctcaagttgaaatagtagtttcaagacct
attggggatattccaagaattcctgaaacttcccatcctccactagaatccagttcaagt
tcatttgagtctcagaaaatggagagaccgtcaatttctgttatctctccaactagtcct
ggaacactaagagatgcacctcaagtactacctggacaactgtcagtaaaattatggtat
gacaaagttggacaccagttaatagtaaacgtactacaagcaacagaccttccggctaga
ccggatgggaggccaaggaatccatatgtaaaaatgtattttcttccagatagaagtgac
aagagtaaaagaaggaccaaaacagtaaagaaaagctcagaacctaagtggaatcaaacc
tttctatattcccatgtgcatcggagagacttccgggaacgaatgttagaaatcactgtc
tgggaccaaccaaggatacaagaagaagaaagtgactttcttggagagattctaattgaa
ctggagactgccctattagatgatgagccacactggtataaacttcaaacacatgatgta
tcttcactacctctgcctcagccatcaccgtacttgccacggaggcatgcacgtggggaa
agcccatgcaaaaaattacaaagatctcagcgaattggtgatagtgatatctcagattat
gatgtcgatgatggtattggagtagtgtcaacagcagtagagtataggtctcatggtaga
gaaaataaatccacaacacttactgtgccagaacaacagagaacaacacatcatcgctct
cgatctgtttctcctcaccgaggtgatgaccagggcaggacccggtcacagttaccatgt
gtgccactgcagaggagtttagatgaaattcatcaatcaagacgatcacgctcaccaact
agaaaccatgatgcctctagaagtccaaaagatcgtaggtctaaagatatggacactcag
tattatgcagaggaaagtgagttcctcatgctacccagagcaaagagagggagaagtgca
gaatgcctgcatactaccagtgatctacagccttctcttgacagggttagaagtgctagt
accaactgtttgagaccagatactagtttccattcaccagaacgagaaaggaatagatgt
tctcaatcactggataggagacggcctactagccccaggatttatatccagcatgcttcc
ccagaagatgacagctggacggtggagcctgttgttccaaaacaggagactgtaaatcat
cttagtgctaaacccagagcagctcagaggcagtcaagaacactggaaagatgtaacatc
caaaaacagagtaaaaagtacactgcaacagacaatgaaagcctcaaatatataaaatta
tgtcttgtcttttattgttttttatttcctgtttattttgatacaaacagtgcgtttact
tctaaaatgtacagcagacagatgaggacatcagggagaaacatgctgaagagcaccagt
gtgagtggagagatgtacaacttggagaggaacgatggaagtcagtcagacaccgcaatt
ggaaccgtgggaacaggaggaaagaaacgccgttccagcctgagtgcccgagtggtggca
attgtcggcctgccatcacggcgaagtagaagcacatctcagcttagtcagacagaggct
gccaataagaagttgaaaagtaccattcaaagaagcacagagacagggatggcagtggaa
atgagaaatcgaatggtccgccagccaagccgtgagtccaccgatggaagtatgaacagc
tatagctcggaggggaatttgatattttctggagtgaggttgggagcagacagccaattt
agtgattttttggatgggcttggacctgcacagcttgttggaagacagacccttgctacc
cccgctatgggtgatattcagattggtatgatggataagaagaggcagttagaagttgaa
gtcataagagctcgaggtctcacatcaaaaccagggtcaaaatctctccccgctccctat
gtcaaggtttacctcctagagaatggagcatgtatagccaaaaagaaaacaaagattgca
cgaaaaacacttgaccccctatatcagcagtcactactttttgatgagagtccacaggga
aaagtgcttcaggtgatagtctggggagactatgggcgtatggaccacaagtgttttatg
ggagtcgcacaaatcctattggaagagttagacttgtctagtatggtgattggctggtac
aaactgttcccaccctcctcccttgtggatcccacattagcacctctgacccgcagggct
tcccagtcatctcttgaaagttcaacaggacctccgtgcataaggtcatag
DBGET
integrated database retrieval system
