Polypterus senegalus (gray bichir): 120516981
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Entry
120516981 CDS
T08668
Symbol
rps27a
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03010
Ribosome
psex04120
Ubiquitin mediated proteolysis
psex04137
Mitophagy - animal
psex04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
120516981 (rps27a)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120516981 (rps27a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120516981 (rps27a)
04137 Mitophagy - animal
120516981 (rps27a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
psex03011
]
120516981 (rps27a)
04121 Ubiquitin system [BR:
psex04121
]
120516981 (rps27a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psex04147
]
120516981 (rps27a)
Ribosome [BR:
psex03011
]
Ribosomal proteins
Eukaryotes
Small subunit
120516981 (rps27a)
Archaea
120516981 (rps27a)
Ubiquitin system [BR:
psex04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
120516981 (rps27a)
Exosome [BR:
psex04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120516981 (rps27a)
Exosomal proteins of colorectal cancer cells
120516981 (rps27a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
120516981
NCBI-ProteinID:
XP_039594956
LinkDB
All DBs
Position
16:complement(82442767..82448415)
Genome browser
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPADECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaaccttgactgggaagactataaccctagaggttgagccttct
gatactattgaaaatgtcaaggcaaaaattcaagacaaggaaggcattcctccagatcag
cagcgattgatctttgctggtaagcagctggaagatggacgcactttgtccgactacaac
attcaaaaggaatcaacacttcatcttgtgttgaggcttcgtggtggtgccaaaaagaga
aagaagaagtcttacaccacacccaagaagaacaagcacaagagaaagaaggtcaagctt
gcagtgctcaagtactacaaggttgatgaaaatggaaagatccaccgcttgcgacgcgag
tgccctgcagatgagtgtggtgctggtgtcttcatggccagtcactttgatagacattac
tgtggcaagtgttgtctaacttactgttttaacaagcctgaagacaagtaa
DBGET
integrated database retrieval system
