Polypterus senegalus (gray bichir): 120517080
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Entry
120517080 CDS
T08668
Symbol
smarce1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120517080 (smarce1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psex03021
]
120517080 (smarce1)
03036 Chromosome and associated proteins [BR:
psex03036
]
120517080 (smarce1)
Transcription machinery [BR:
psex03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120517080 (smarce1)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120517080 (smarce1)
PBAF complex
120517080 (smarce1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Sarcoglycan_2
Pepsin-I3
Motif
Other DBs
NCBI-GeneID:
120517080
NCBI-ProteinID:
XP_039595103
LinkDB
All DBs
Position
17:complement(17199308..17226745)
Genome browser
AA seq
426 aa
AA seq
DB search
MSKRPSYAPPPPPAPTTQMPSTPGFVGYNPYSHLAYNNYRLGGNPGSNSRVTNSSGITIP
KPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYE
AEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQRQSRIEKGEPYMSIQPAEDPD
DYDDGFSLKHTAAARFQRNHRLIGEILSESVVPDVRSVVTTARMQVLKRQVQSLMVHQRK
LEAELLQIEDRHQEKKKKFLETTDLFNSELKRLCGLKVEVDMEKIAAEIAAAEEAARKRQ
EDREREAAEQAEKAAAAAALEEEQQAAAASRVAEEEEEKKEDEDEEAESTPMETEEARPE
EVLESQQNSEEGASTTEDKESMPEGVDSAMEEGTSDSNTGSESNGLLTEDQHIDPISDEA
DRGEKK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagaccatcctatgcgccacctcctcctcccgcgccaacaacacaaatgccc
agcacccccgggtttgtgggatacaacccatacagccatctggcctacaacaactacagg
ctgggagggaaccccggtagcaacagccgggtcacgaattcttccggaataacaattcca
aagccacccaaacctccagataagcctttgatgccatacatgaggtatagcagaaaggtt
tgggaccaagtaaaagcctcgaatccagacttgaagctatgggagattggcaagatcatc
ggtggcatgtggcgagacctcactgatgaggagaagcaggaatacctcaatgaatatgaa
gcagaaaagattgagtacaatgaatccatgaaagcctaccacaattcacctgcctacttg
gcctatattaacgccaagagccgtgcagaagcggccctggaggaagagagccgacagagg
caatcccgcatagaaaagggggagccttacatgagcattcagcctgcagaggaccctgac
gattatgacgacggcttctcactgaagcacacggcagcagcccgttttcagaggaaccat
cggcttattggagaaattctaagcgagagtgtggtgcctgatgtgcgctctgtggtgacg
actgctcgcatgcaggtcctgaaacgccaagtccagtctttaatggttcaccagagaaaa
ttggaagctgaacttctacagattgaagaccgccatcaggaaaagaagaaaaaatttttg
gagacaaccgacttattcaacagcgaactgaagcggttgtgcggcctcaaggttgaagtt
gacatggagaagattgcggcagaaattgcagctgccgaggaggctgccaggaagcgccag
gaggatcgggagagagaagctgcagagcaggcggagaaagccgcagctgcggccgccctg
gaagaggaacagcaagccgctgcagccagtcgagtagcggaggaggaagaggaaaaaaag
gaagatgaagacgaagaagctgaatccacacctatggaaacggaagaagcacgaccagaa
gaggtgctggaaagccaacagaacagcgaggaaggagcgtcaactacagaagataaggag
agtatgccagaaggggtggacagtgccatggaggaggggacgagtgacagtaatacaggc
tcagaaagcaatggcctcctgactgaagatcagcatattgaccccatatctgatgaggca
gacagaggggagaaaaaatag
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integrated database retrieval system
