Polypterus senegalus (gray bichir): 120517105
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Entry
120517105 CDS
T08668
Symbol
ubtf
Name
(RefSeq) nucleolar transcription factor 1
KO
K09273
upstream-binding transcription factor
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120517105 (ubtf)
03021 Transcription machinery [BR:
psex03021
]
120517105 (ubtf)
Transcription factors [BR:
psex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
120517105 (ubtf)
Transcription machinery [BR:
psex03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
120517105 (ubtf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
HMG_WDHD1
Prenyltrans
Motif
Other DBs
NCBI-GeneID:
120517105
NCBI-ProteinID:
XP_039595146
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All DBs
Position
17:complement(300659..310455)
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AA seq
743 aa
AA seq
DB search
MNGATEPPARDVLAKEQDAWSKEDLLHLLENMKLNIPPNDVSKFKTSESHLNWDKVAFNH
HTGDVCRQKWLQISNKIRKFRTLTELIVDAEDQVQNPYKGKKLKQHPDFPKKPLTPYFRF
FTEKRAKYAKLHPEMSSLDLTKILSKKYKELPEKKKMKYIEDFQREKEEYERSMDKFRKD
HPDLMENLKRSDVPDKPKTPQQLWYNHEKKAYLKNYPDATTKEIKENLAKQWTQLSDKKR
LKWINKSLEQQKQYEELMRVYVHQHPELNISQEVISKSTLTKAERQLKDKFAGRPTKPPP
NCYSMYCAELMSNMKDVPSTERMMMCSKQWKLLSQKQKDVYQKRCEQRKKDYEVELNRYL
CSLPEKEQQRVLEEEKMQGYNKRVTSSPSSRSNSNAKGSSGKPKRPISAMFIFSEEKRKK
LQEERPDLSENELTRLLARMWNELSDKKKEKYKRLEAVVKAESEKERSSLPESPKTAEEI
WQQSVIGDYLARYRNDRAKALKAMEATWNTMEKKEKMMWIKKAAEDQKRYERELSEMRAP
PPSGKKMKFEGEPKKPPMNGYQKFSQELLSSGELNHLPLKERMVEIGGRWHKLTQAQKDR
YKKIAEERQKQYKVQLEHWLKSLSSTDRMAYKEYTSSKRKTTSKPGGPTAKVKASGSKKS
ESEDDEEDDDEDDDDDEDEEEEEDEEEKESSEEESSSEGSDDDDDDEEDEEKEEEEEEDK
ENESESSNSSSSSSEESTESESD
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgaacggagcaacggagcccccggcccgggacgtgttggccaaagagcaggacgcctgg
tcgaaggaggacctgctgcacctcctggagaacatgaagctcaacatccccccgaatgac
gtcagcaagttcaagacgtcggagtcgcacctcaactgggacaaggtggccttcaaccat
cacacgggggacgtgtgcaggcagaagtggcttcagatctcaaacaagatccgtaagttc
cgcacgctaacggagctgattgtggacgctgaagaccaagtccagaatccttacaagggc
aagaagttaaagcaacatcccgacttcccaaagaagccgctgactccgtacttccggttc
ttcacggagaagagagccaagtatgccaagctgcaccccgagatgagcagcctggacctc
accaagatcctgtccaagaagtacaaggagctgccggagaagaagaagatgaagtacatc
gaagactttcagagggagaaggaagagtacgagcgcagcatggacaagttcaggaaagat
cacccggacctgatggagaacctcaagcgctcggacgtcccggacaaaccaaaaacccct
cagcagctttggtacaaccacgagaagaaggcctacctgaagaattacccagacgcgaca
acaaaagagattaaagagaatttagccaagcagtggacgcagctgtctgacaagaagcgg
ctcaagtggatcaacaaatccctggagcagcagaagcagtatgaggagctcatgcgggtc
tacgttcaccagcaccctgagctgaacatctctcaggaggtgatcagcaagtccaccctc
accaaagcagagaggcagctgaaggacaaatttgcgggccgacccaccaagccacccccg
aactgctactccatgtactgcgccgagctcatgtccaacatgaaggacgtcccgagcacc
gagcggatgatgatgtgcagtaagcagtggaagctgctctcccagaagcagaaggacgtt
taccagaagcgctgtgagcagagaaagaaggattatgaagtggagctgaaccgctacctg
tgttctctgccagaaaaggagcagcagcgtgtgctggaggaggagaagatgcagggctac
aacaagagagtaaccagcagcccctcatccaggagcaactccaacgccaaggggagctca
ggtaagcccaagcggcccatctctgccatgttcatcttctctgaggagaaacgcaaaaag
cttcaggaggaacgtcccgatctgtcagagaatgagttgacccgcctgctggctcggatg
tggaatgaactgtcggataaaaagaaggagaagtacaagcgcctggaggcggtggtgaag
gccgagtccgagaaggagcgcagcagtctacccgagtcccccaagacggccgaggagatc
tggcagcagagtgtcattggcgattacctggcccgctaccggaatgaccgggccaaagcc
ctcaaagccatggaggccacctggaacacgatggagaagaaggagaagatgatgtggatc
aagaaagctgccgaggatcagaagagatacgagagagagctcagtgagatgcgagccccg
cctccctcgggcaaaaagatgaaattcgaaggggagcccaagaaacctcccatgaacgga
taccagaagttctctcaggagctgctgtccagtggggagctcaatcacttaccgctgaag
gagcgcatggtggagatcggaggccgctggcacaaactgacgcaggctcaaaaggaccgc
tacaagaagatcgccgaggagaggcagaagcaatataaggtgcagctggagcactggctc
aagtccttgtcctccaccgacagaatggcctataaggagtacacgtcaagtaaaaggaaa
accacgtcaaagcccgggggtcccactgccaaggtgaaggccagcggctccaagaagtcg
gagtcagaggatgacgaagaagacgacgacgaggatgatgatgatgatgaggacgaggag
gaggaagaagatgaggaagagaaggagtcttcagaagaagagtcttccagtgaaggaagt
gatgatgatgatgatgacgaggaggatgaagagaaggaggaagaggaggaagaggacaag
gagaacgagtcggagtccagcaacagcagctcctccagctcggaggagagcacggagtcg
gagtcggactga
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