Polypterus senegalus (gray bichir): 120517136
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Entry
120517136 CDS
T08668
Symbol
sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psex01009
]
120517136 (sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psex03021
]
120517136 (sfpq)
03041 Spliceosome [BR:
psex03041
]
120517136 (sfpq)
Protein phosphatases and associated proteins [BR:
psex01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120517136 (sfpq)
Transcription machinery [BR:
psex03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120517136 (sfpq)
Spliceosome [BR:
psex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120517136 (sfpq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
120517136
NCBI-ProteinID:
XP_039595218
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All DBs
Position
17:20308045..20324727
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AA seq
574 aa
AA seq
DB search
MSRDRFRNRGGFQRRGGSGGVSGSGGRGGMVGGNGNYRHQNQSQNRSPMHQGQPPNKPTT
PGGQSAPGATQPPPNPQQLQQQTQQGAAGQVKSPQSGQNKVPASPPKSSTPGGQTQDGNQ
KDNQEPSTSPPKQEPQTEEEKAAATQQELRATLSLLRKPGEKTYTQRCRLFIGNLPTDIS
DDEFKKLFAKYGEPSEIFINKIKGFGFIRLESRALAEIAKAELDDFPMKGRQLRVRFATH
SAALSIRNLSPFVSNELLEEAFSQFGQVERAVVIVDDRGRSSGKGIVEFASKPAARKALD
RCHDGVFLLTASPRPVIVEPLEQYDDEDGLPEKLAQKNPMFQKEREQPPRFAHPGTFEYE
YSQRWKSLDDMEKQQREQVEKNIKEAREKLESEMEDAYHEHQANLLRQDLLRRQEELRRM
EEMHSQEMQKRKEMQLRQEEERRRREEEMILRQREMEEQIRRQREDSYRMGGYMDNRERD
MRMSAAGTMGMTESPPYAPGNQKFMGGMGFDAQGMSSAAPGGMAASMMGGEMRGERFSQG
GPSPMGGPSGPRGMGPGFGRGREEYEGPTKKQRF
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtctagagatagatttaggaatcgtggtggcttccaaagacgcggtggtagtggcggt
gttagcggcagcggcggccggggtggaatggtaggtggaaacggtaattacagacaccag
aaccagtctcagaacaggagtcccatgcatcaaggacaaccaccaaacaaacccaccact
cctggaggccagtccgcgcctggagcaacgcagccaccgccaaatccgcaacagctgcag
caacaaacacaacagggcgctgccggccaagtgaagtccccacagtcggggcaaaataag
gtcccagcgtccccaccaaagtcgtcgaccccaggaggacaaacgcaagacgggaaccaa
aaggacaatcaggagccaagcacatcaccacccaagcaggagccacaaaccgaggaagaa
aaggcggctgccacacagcaggaactaagagcaaccctgtcactgctcagaaaacctgga
gagaagacttacacccagcgatgtcgtctattcattggaaacctgcctaccgatatctca
gacgacgagtttaaaaaattgtttgccaagtacggagaacccagcgagatctttataaac
aaaatcaaaggatttggattcattcgactagaatccagagcattggcagagattgctaaa
gcagagcttgacgacttccctatgaaaggaaggcaactccgggtccgctttgcaacacat
tctgctgctctttctatccgcaatctttctccgtttgtttcaaatgaattacttgaggaa
gccttttctcagtttggccaagtggagagagctgtggtgattgtggatgatagaggcagg
tcatcgggcaaaggaattgtggaatttgcatccaaaccagctgcaaggaaggctttagat
aggtgtcatgatggggttttcctgttaacagcgtctcctagacctgtcattgttgaaccc
ctggagcagtatgatgatgaagatggccttccagagaagcttgctcagaaaaaccccatg
tttcagaaagagcgagagcaaccaccacggtttgcacaccctggtacttttgaatatgaa
tattcacagagatggaagtcattggatgacatggaaaagcagcaacgggagcaggtggaa
aagaatattaaggaagccagagagaaactagagagtgaaatggaagatgcttatcatgaa
caccaagcaaatcttttgcggcaagatcttttgaggcgtcaggaagaactaagacgcatg
gaggaaatgcatagccaggaaatgcagaaacgaaaggagatgcagttgcggcaagaggag
gaacggcgtaggcgtgaggaagaaatgatcctgcgtcagagagaaatggaagagcaaata
agaagacagagggaggattcttatcgcatgggaggatatatggataatcgtgaaagggat
atgagaatgagtgctgctggaaccatgggcatgactgaatcaccaccatatgcacccggc
aatcagaagtttatgggtggtatgggatttgatgctcaaggaatgagttctgcagctcct
ggaggcatggctgcctctatgatgggcggtgaaatgcggggtgagcgcttcagtcaggga
ggaccgagccctatgggaggcccctctggccctcgagggatgggacctgggtttggtagg
gggagagaagagtatgaaggcccgaccaagaagcaaagattctaa
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