Polypterus senegalus (gray bichir): 120517142
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Entry
120517142 CDS
T08668
Name
(RefSeq) protein argonaute-1 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120517142
03036 Chromosome and associated proteins [BR:
psex03036
]
120517142
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
120517142
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
120517142
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
120517142
microRNA pathway
RISC loading complex
120517142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
120517142
NCBI-ProteinID:
XP_039595223
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Position
17:complement(19674267..19711755)
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AA seq
858 aa
AA seq
DB search
MEPGPSGAVPVGPLLPPLQQVFQAPRRPGIGTVGKPIKLLANYFEVDIPKMDVYHYEVDI
KPDKCPRRVNREVVEYMVQHFKPQIFGDRKPVYDGKKNIYTVTALPISNERVDFEVTIPG
EGKDRIFKVSIKWMAIVSWRMLHDALVSGRIQVPLDSVQALDVAMRHLASMRYTPVGRSF
FSPPEGYYHPLGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYKAQPVIEFMCEVLDIR
NIDEQPKSLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLESG
QTVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQT
STMIKATARSAPDRQEEISRLMKNASYNLDPYIQEFGVKVKDDMAEVTGRVLPAPILQYG
GRNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQLRKISKDA
GMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLG
MATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQQPVIFLGADVTHP
PAGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRFKP
TRIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLFCADKN
ERIGKSGNIPAGTTVDTNITHPFEFDFYLCSHAGIQGTSRPSHYYVLWDDNRFTADELQI
LTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSGEGSHISGQSNGRDPQA
LAKAVQVHQDTLRTMYFA
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaggaccatcaggagccgtgcctgtggggccgttgttgcctccactgcagcag
gtattccaggcacctcgtcgccctggaattggcacagtggggaagcccatcaagctgctt
gccaactactttgaagtggacatccccaagatggacgtgtaccattatgaagtggacatc
aagcctgacaaatgccctcggcgggttaacagggaagtggtggagtacatggtgcagcat
tttaagccccagatctttggagacaggaagccagtttatgatggaaagaagaatatctac
acagtcactgcactgccaatcagcaatgagcgggttgactttgaggtaacaatcccaggt
gaaggtaaagatcgaatatttaaggtttctatcaaatggatggctattgtaagctggcgc
atgctgcacgatgcattagtcagtggccgaattcaggttcctctggattctgtccaggct
ttggatgttgcgatgcggcacctggcatctatgaggtacactccagttgggcgttcattt
ttctcaccaccagagggttactaccatcctctaggaggaggccgtgaggtttggtttggc
ttccaccaatctgtgaggcctgcaatgtggaacatgatgctcaatattgacgtctcagcc
acagcattttataaggcccaaccagtgattgaattcatgtgtgaggttctggatattcga
aacattgatgagcagcccaagtccctgacagactcccagagagtacgctttacaaaggag
attaaagggctgaaggtggaggtgacgcactgtggacagatgaagcggaaatatcgtgtg
tgcaatgtgaccagacgtccagccagtcaccagacatttccactacagctggagagtggg
caaaccgttgagtgcacagtagctcaatacttcaaacaaaagtacaatctgcagctaaaa
tatcctcatttgccctgtctgcaggtgggacaggagcagaaacacacatacttgcccctg
gaggtctgtaacattgttgccgggcagcggtgtatcaagaaactgactgataatcagaca
tcaaccatgattaaggcaaccgctcgttcagctcctgaccggcaagaagagatcagccgg
ctgatgaagaatgccagctataacctagatccctacattcaggagtttggagtgaaagtg
aaggatgatatggcagaagtgacgggtcgagtgcttccagcaccaattcttcagtatgga
ggaaggaacagggcaattgccactccaaatcagggtgtttgggacatgagaggaaagcag
ttctacaatggtattgagatcaaggtatgggctattgcctgctttgcaccacagaaacaa
tgtcgggaagaggttctcaagaattttacagaccaacttcgcaagatttcaaaggatgct
ggcatgcccatccagggacaaccctgcttctgtaagtacgcgcagggtgctgatagtgtg
gagcccatgttccgtcacctgaaaaacacctattcgggactgcaacttatcatagtcatc
ctgcctggcaagacacctgtgtatgcggaggtcaagcgggttggagacactctacttggg
atggccactcagtgtgtgcaggtaaagaatgtggtaaagacttccccacagaccctgtcc
aacctctgcctgaaaatcaatgtcaaactgggtggaattaacaacatcctggtcccacac
caacgatctgcagtattccagcaacctgtcatttttctcggagctgatgtaacacacccc
ccagcaggtgatgggaagaagccttccataactgcggtggtggggagcatggatgcacat
ccaagccggtactgtgccacagtgcgtgtgcagcgtccaagacaggaaatcattgaggat
ctttcctatatggtacgtgagttgctgatccagttctataagtccactcgcttcaagccc
actcgaataattttctaccgtgatggagtcccagaaggacagcttccacagattctccat
tatgagcttcttgccatccgagatgcttgtatcaagttggaaaaagactaccagcctggt
atcacatatattgttgtgcagaagcggcatcatacacgactgttttgtgctgacaagaat
gagcggattggaaaaagtggcaacatccctgcaggaacaactgtggatacaaacattact
cacccatttgaatttgacttctacctgtgcagtcatgcggggatacagggtacaagccgt
ccttcccattattatgtcctttgggatgataaccgcttcacagcagatgaattgcagatt
ctaacatatcagctatgccacacttatgttcgttgtacccgttccgtatccatccctgca
cctgcctactatgcaagacttgttgcatttcgagcacgatatcacctggtggacaaggag
catgacagtggtgaaggcagtcatatctctggacagagcaatggccgtgacccccaggcc
ttggcgaaagctgtacaggtgcaccaagacactctaaggaccatgtattttgcctga
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