Polypterus senegalus (gray bichir): 120517191
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Entry
120517191 CDS
T08668
Symbol
med1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1 isoform X1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psex03021
]
120517191 (med1)
Transcription machinery [BR:
psex03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
120517191 (med1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med1
Motif
Other DBs
NCBI-GeneID:
120517191
NCBI-ProteinID:
XP_039595293
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Position
17:complement(19186233..19217995)
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AA seq
1807 aa
AA seq
DB search
MATMAGVCVPVGTLAGELGVNATASPPVDRATSDESTEAEKQAKMSSLLERLHNKYNASR
PWPETMKLVRQAMEKRISLNTGAHQCLVSCLETLQKALKVTSLASMTDRLESIARQNGLG
SHLSTSGTECYITSDMFYVEVQLDVTGQLGDVKVAHHGETPVSCPELVQHLRERNFEEFS
KHLKGLVNLYKLPGDNKLKTKMYLALQSLELDLTKMMHMFRLATSGSTLYTILHGSVGLL
TPRCGGHLMNLKCYVSPSDVLACDMLEEGTGALLQLSDVNVNAVPRSLGLNVSVTIEGVS
SMYKLPIAPLITGSHPVDNKGTPSFSSVTNSNCVDLPACFLLKLQQPIPFSSAFIQKLES
CTGIPIPDLAPSRTPLYELITQCKLQEEGGPPLSAHGMRFYASLPGQQHCYFLNSDAPVH
NGQCLQGTLLSKIPFRHPAQVPGLLDLIRHQATYNTLIGSCVKRTVLKDDSPGLLQFEVC
PLTDTSFSISFQHPVNESLVCVVMDVMDSHRVYCKLYKGLSDALICTDDFITKVVERCMS
IPVTMRAIRRKAETIQADTPALSLIAETVDAIPKSRLPHTGSPEYSMGTGGSGGTGNSQL
GTPGGSCGSGGNSFLGPITLFDMGLGLKDRQAAGVGSTGGGPSLGSGSGPGESSNPVSGV
PAHTDDFNKVTQNPILTSLLQITGSVGSSPTPPPSSAQPHLTPPPVSSPASNTKNHPMLM
NLLKDNPAQDFSGLYGSSNLERQNSAGSPLTDPSGAPTASGSKPKKKRPRASASMSDKSG
NGGMCLNKPQHQTEDDFHRELFSMDVDASQNPIFDVGIPGDGLDTPHNITPAPSQCGTPP
AGVVVGGVAPTYHHSLPSHPHASHGLAPQGRMVRLSSSDSIGADVNDILSDIAEQTSKIS
GVGGSHVHTHAGSIGGDDSGTLGTPVRDSSSSGQGSTLFDTDVFAAGSNENPFATDPADL
LAEAATATTPNSDSSSNNFFADTDFNPELLHSQGFPQNYFDESSHSGDGDLELPKSYSSG
VSQSQSGAQSTPIPQNPSQGQHHLPDSSMKDPFEMNVFGGSGGGGKPPLGSLMSSSDVGE
PPLAHAGGNQSPSMSMIGGSGGGSGILDGEFGKGDSSKSSKQLQQQMRGVSCKDGNGAGS
LGGSCMAGGGLSSEAKGKRSRTPSSDGKSKEKAAKRKKIDPEGKSPSHSSASRPFTPPAS
VSGTSGGSKSPGTSGRSQTPPGGVTGAGGATPPIPKITIQIPKGTLAGVKTSSHSGYTSS
SSGGGSGSGGGGGGSKSHHSHSSSSSSSKTKSGKSESSLTQGGASGGSSGMYSSGVSGNT
MGGNSLSKAASLGGGKPGSSPVAKHGLSSTGGAGGSKIKPQGGKPPASLINPTLGKPSIS
PSHSRSSSGTSSSDKLSSPMKQQQVPGTPPSSKAKSPIGSGGSHISGTGGGSSSKSSGSG
LGSQKQTGSTSSSSSSSTSSTSSSSSSSSSFSTGSQSQYGAGGGGTNPNAKGKSPSRNKK
PSLTAVIDKLKHGVGTSVGPEEGGDGGVPSGMAPSSQHGMSSKHNLATGQGGDYSSGKRE
KNDKDKSKVSVSSGGSGDKKSLDSKNVGSTGVAKIIISKPDGGSPSIKAKVTLQKPGDVT
ADGLRPQLSTSKAYGSPLFSGSTPKHERCSPSHSKSPGYTPQNNDSESESGSSSVAEKSH
QNSPSSDDDHSLRPLQQQQQQQHEYSTGSEKHKKHKKEKKKQKDRDKERDRERDKERDKE
REKKKSSFGHSLKSDGWSKSPITSGDASLSLLGSERPSRPSPGYLRSEDDDLMDSALTGN
LDSFLGK
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaatggcgggggtatgtgtgcctgtgggcaccctggctggagaactcggggtg
aatgccaccgcgtcaccgccagtcgatcgagccacctcagatgaaagtacagaggcagaa
aagcaggcaaaaatgagttccttgctggagcggctacacaacaaatacaatgcttccaga
ccctggccagaaaccatgaagcttgtgcgtcaggcaatggagaagagaatcagtcttaac
acaggggcccatcagtgtctggttagctgcttggaaacactgcaaaaagcattgaaagtg
acatcattggcttccatgacagatcgactggaatccattgctcgacagaatgggctgggt
tctcatctaagtacatcagggacagagtgttacatcacctctgacatgttctatgttgaa
gtgcagcttgatgtcacaggtcagctaggagatgtcaaggtagcgcatcatggtgaaacc
cctgtgagctgtccggagctggtacaacatctcagagaaagaaactttgaagaattttcc
aagcatctaaaaggccttgtcaacctatataagcttcctggagacaacaaactgaaaaca
aagatgtacctggcgctacagtccctggagctcgaccttacaaaaatgatgcatatgttc
aggttggcaaccagtggcagtactttatacaccatacttcatggcagcgtaggacttctg
actcctcggtgtggaggtcatttgatgaatctcaaatgttatgtgtctccatccgatgtg
ttagcctgtgatatgcttgaagaaggaactggggctctccttcagctgagtgatgttaat
gtcaatgcagtcccacgatctctgggcttgaacgtgtcagtgacgattgaaggggtttca
tctatgtacaagcttcccattgcaccactgatcactggttcacatcctgtagacaacaaa
ggaacaccatctttttcttccgtcaccaactcaaactgtgttgatctgccagcctgtttt
cttctgaagcttcagcaaccaatacccttttcttcagcatttatacagaagctagagagc
tgcacaggaattcccattcctgacttggccccatcccggacacctttgtatgaactcatt
actcagtgcaaattacaagaggaaggcggcccaccactttcagcacatggcatgcgtttc
tatgcttctttgccaggacaacagcactgctacttcttgaacagtgatgcgccagtgcat
aatggtcaatgtctgcaagggacactcctgtcgaagattccattccgtcacccagcacag
gttcctggactgctggatctgatccgccatcaggcaacatacaacacgctgattggtagc
tgtgtcaagcgcactgttctcaaagatgattctcccggcctcctccagtttgaggtgtgt
ccgctcacagacacgagcttcagcatttcctttcagcaccctgtcaatgaatccctagtc
tgtgtggttatggatgtcatggattctcatcgggtgtactgcaagctctacaaagggttg
tcagatgcccttatttgtactgatgactttattaccaaagtggtggagaggtgcatgtcc
atccctgtaacaatgcgtgctattcgtcggaaggctgagacaatacaagccgacacacca
gctttatcccttattgctgagactgtggatgcaataccaaaaagtcgtttaccacacact
ggaagccccgagtatagcatgggcaccggtgggagtggtggaactggaaacagccagcta
ggcacccctggaggaagttgtggcagtggtggaaattcttttttgggcccgatcacttta
tttgacatggggttgggtctgaaagatcgccaggctgctggagtaggaagcacaggaggt
gggccaagtctaggaagtggttctggaccaggggaaagctccaatcctgtgagtggagtg
ccagcacatacagatgacttcaacaaagtcacccaaaatccaatcctcactagtcttctg
cagatcacaggcagtgtagggtctagtcctactcctcctccatcttcagctcaacctcat
ctcacaccgcctccagtgtcctctcctgccagcaataccaagaaccatcccatgcttatg
aatctcctaaaagacaatcccgctcaagatttctccggcttatatggatcaagcaatttg
gaaagacagaattctgcaggttctcctctgactgatccatctggagcacccactgcttct
ggtagtaagcccaaaaaaaagcgcccacgggcctctgcttccatgtcagacaaaagtgga
aatggtggcatgtgtctgaacaagcctcagcaccaaaccgaggatgactttcacagagaa
ttgttttctatggatgttgatgcttcacaaaacccaatttttgacgttggcatacctgga
gatggtttagacactcctcacaacatcacccctgccccgagccaatgcggtacccctcct
gcaggagtggttgtgggtggtgtggccccaacctatcatcactccttaccttcacaccca
catgcctcacatggacttgccccacaaggcaggatggttagactctccagctcggacagc
attggtgcagatgtgaatgacatcctgtcagatattgctgaacagacttcaaagatttct
ggtgtaggaggcagccacgttcacactcatgctgggagcataggtggtgatgacagcggg
acgctgggtacacccgtcagagactcttcaagctcagggcagggcagcacactgtttgac
actgatgtttttgctgcaggcagcaatgaaaatccttttgccacagatccagctgacctt
ctggcagaggctgctacagccactacacccaacagtgactcatcatctaataatttcttc
gcagacacagatttcaatcctgagctactgcacagtcagggtttcccacaaaactacttt
gatgaaagcagtcacagtggagatggagacctggaactgcccaagtcatacagtagtgga
gtctcacagtctcagtcaggtgcacagtcaacaccaattcctcaaaaccccagtcagggg
cagcatcaccttccagattcttcaatgaaggacccttttgaaatgaatgtatttggggga
agtggaggtggtggtaagccccctttagggagtctcatgtcaagttcagatgtaggggag
cctcctttagctcatgctggtggaaatcagagcccatcgatgtccatgataggcgggtca
ggtggaggcagtgggattctggatggagaatttggaaagggggactcctcaaagtccagt
aaacagcttcagcagcagatgagaggggttagctgcaaagatgggaatggcgcgggaagc
ctaggaggctcctgcatggccggtggaggcctgtcttctgaggccaagggaaagcgtagc
cgcactccgtctagcgatggtaagagtaaagaaaaggcagcaaagcgaaagaagattgac
cctgaggggaagtctccttcccacagttctgcaagtcgccctttcactcctcctgccagt
gttagtgggactagcggtggatcaaaatctccagggacctccggcaggtcacagactccc
cctggaggagttacaggagctggaggtgcaactccccccatccctaaaattaccatccag
atcccaaaaggaactctggctggagtgaagacctcttcccatagcgggtacacctcaagt
agctctggggggggcagtggaagtgggggaggaggaggaggtagtaaaagtcaccactcc
cattcctcctcctcttcctcgagcaaaactaaaagcggtaaatctgagagctccctgaca
caagggggagcgagcggggggtctagtggaatgtattcttcaggggtaagcggcaacacc
atgggggggaactctttatctaaagctgcctctctaggtggaggcaagcctggttcttcc
cctgtggctaaacacggattgagcagtacagggggggcaggtggcagtaagattaaacca
caagggggcaaaccgcctgcctctctcattaaccccacattagggaagccaagcatctcg
ccatcccactccaggagtagcagtggcacgagtagttctgataaactgtcttctccaatg
aagcagcagcaagtaccaggaacgcccccatcctctaaagcgaagtcaccaatcggatct
ggggggtcccatatatctggtacaggaggtgggagcagttcaaaatcttctggcagtggg
ctagggtcccaaaagcaaacaggaagcacatcatcctccagttcttcatctacttcgtcc
acctctagctcttcgtctagttcctcctcattctcaactggatcacagtcccaatatggt
gctggaggtgggggcaccaacccaaatgcaaaaggaaagtctcctagcagaaacaagaag
ccatcactgactgctgtcattgacaaactgaagcatggagttgggacttcggtaggaccc
gaggaaggaggagacggtggtgtaccctctggcatggcaccatcatctcagcatggcatg
agctctaaacataatctagccacaggccaaggaggggactactcctctgggaagagggag
aagaatgataaggacaaatccaaagtatctgtgtcgagtggaggatctggtgacaaaaag
tctttggactctaaaaacgtgggtagcaccggagtggccaaaattatcatcagcaaacca
gatggtggctcgcccagcattaaagctaaggtgactctgcagaagcccggagatgtaacg
gctgatggactccggccacagctttccacctctaaggcgtacggctcccctcttttcagt
ggctccacccccaaacatgagcgctgctccccgagtcatagcaagtctcctggctacact
cctcagaacaacgacagcgaaagcgagtccgggagtagctcagttgccgagaagtcacac
caaaacagccctagctctgatgacgaccactcgctacggccactgcagcagcaacaacag
cagcaacacgagtacagcacaggcagcgagaagcacaagaagcacaagaaagagaagaag
aagcagaaagatcgagacaaggaacgggacagggaacgagacaaggagagggacaaggag
cgcgagaagaaaaagtcctcattcggccacagcctaaagtcagacggctggtccaagtcc
ccaatcacatcgggtgacgcttccctgtcactgctgggttctgaacggccatcccgtccc
agcccagggtacctaaggagcgaggatgatgacctcatggattcggcactgactggaaat
ctggactccttccttggcaagtag
DBGET
integrated database retrieval system
