Polypterus senegalus (gray bichir): 120517252
Help
Entry
120517252 CDS
T08668
Symbol
utp6
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog isoform X1
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120517252 (utp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psex03009
]
120517252 (utp6)
Ribosome biogenesis [BR:
psex03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
120517252 (utp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP6_C
U3_assoc_6
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
120517252
NCBI-ProteinID:
XP_039595387
LinkDB
All DBs
Position
17:84542820..84574955
Genome browser
AA seq
597 aa
AA seq
DB search
MAEVIQQRIEDRIPELEQLERVGLFTPTEVRAMLKKVSALEYKLHRRIIGKDDFITYIQY
EINVLDLIKKRRNRIRYHFKREEIEYPIIQRIYDVFKRATSKWKDDIQLWLSFVAFCKKW
ATKKQLSKVFSSVLAIHPDKTALWITAAKWEMEDCSSSESARQLFLRALRFHPDNKKLYQ
EYFRMELMHAEKLCKEKSQLEQAKINLDDYEFSEEIMKGELAKIVYKEAIQKIPGADFIL
SLLSVASLFNFAKDIQEQALQDLQILYTKDPLTWDFMAKRELEVNSLPSTESVSKQSKVT
DMAQKEERCSAVYEEAVMAVPTEAMWTCYVTFCLERFKRKCNSADLKQKRWDRMMSVCHR
AHDLGLLQESLYKQWLHSLQAFGQENKAIEVALAMTKRFSQSVETWKMSLQILMESKSDK
VHSLFQEALAQVTPKESLPLWILKAEWTEANQSSEEIEAFFAKGVLFLVPAVSIALKERY
LDWSFKTGGIKKARKTFARLHECRPLSLEFFRRMLQIEKEQEKCKMENIRECYERALREF
GADEEELWLDYIKEELSHHQGNPENCGKIYWRAMQTLQGEQVESFVSKHTLLQTGHS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagtaattcagcagaggatagaagatcgcatcccggagcttgagcagctggag
agagttggtcttttcaccccgactgaagtgagggcaatgcttaagaaagtgtcagcgctt
gagtataaactgcacagaagaataattggtaaagacgactttattacgtatattcagtat
gagattaatgttttggatctaattaaaaaaagaagaaatcgtattaggtatcattttaaa
agggaagaaatagaatatcctatcatccagagaatatacgatgttttcaaaagggcaact
tccaagtggaaggatgatattcagctctggctctcctttgttgctttttgcaaaaaatgg
gccactaagaaacaacttagtaaggtgttctcttctgtgcttgcaattcatccagacaaa
acagctctgtggatcactgcagcaaaatgggaaatggaggactgttcctcatcagagagt
gcaagacaattatttttacgtgccttgcgatttcaccctgacaacaaaaaactttaccaa
gagtatttccgaatggagcttatgcatgccgagaagttgtgtaaggagaaaagccaatta
gaacaagccaagattaacctggatgattatgaattttcagaagaaatcatgaaaggagaa
ttggcaaagattgtctataaagaggccattcagaaaatacctggagcagatttcattttg
tcgttactgtctgttgcatccctctttaactttgctaaggatattcaagagcaagccctg
caagatctgcagatcctatatactaaagatcctttgacatgggacttcatggccaaaaga
gagttagaagtaaattcgttaccgtctacagaatctgtatctaaacaaagtaaagtgaca
gacatggcacaaaaggaggagagatgcagtgctgtttacgaagaggcagtgatggctgtg
ccaacagaggccatgtggacttgctatgtcacattttgcttggagagatttaagaggaaa
tgtaacagtgcagatttaaaacagaagagatgggacaggatgatgtctgtgtgtcacaga
gcacatgatctgggattgctgcaggaatccctttacaagcagtggctccatagcttacaa
gcctttggtcaggaaaacaaggctatagaagttgctcttgctatgacaaaacgtttcagc
caatcagtggaaacatggaagatgagtcttcaaattctcatggagtcaaaaagtgacaaa
gtccacagtttattccaggaggcccttgcacaagtcacacccaaggaaagtttaccactt
tggattttaaaggcagagtggactgaagcgaatcagagttctgaagagatcgaagccttt
tttgcgaagggcgtcctcttcttggttccggccgtgtctattgctttgaaggaaagatat
ttagactggtcttttaagactggaggaatcaaaaaagccaggaagacttttgcgagattg
catgaatgtcgccctctgtcccttgagtttttcagacgaatgcttcagattgaaaaagag
caggagaaatgcaaaatggaaaacattagagaatgctatgagagggcattacgagaattt
ggagctgatgaggaagaactatggctggattacattaaagaagagttgagtcaccatcaa
ggaaacccagagaactgtgggaagatatactggcgtgcaatgcagactctgcaaggagaa
caggtggagagctttgtctccaagcacacactgctacagacaggacactcatag
DBGET
integrated database retrieval system
