KEGG   Polypterus senegalus (gray bichir): 120517306
Entry
120517306         CDS       T08668                                 
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex03082  ATP-dependent chromatin remodeling
psex03083  Polycomb repressive complex
psex04110  Cell cycle
psex04330  Notch signaling pathway
psex04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:psex00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    120517306
   03083 Polycomb repressive complex
    120517306
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    120517306
   04350 TGF-beta signaling pathway
    120517306
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    120517306
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:psex03036]
    120517306
Enzymes [BR:psex01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     120517306
Chromosome and associated proteins [BR:psex03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     120517306
   HDAC complexes
    Sin3A-HDAC complex
     120517306
    BRAF-HDAC complex
     120517306
    REST complex
     120517306
    SHIP complex
     120517306
    MiDAC complex
     120517306
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     120517306
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    120517306
  Chromatin remodeling factors
   NuRD complex
    120517306
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 120517306
NCBI-ProteinID: XP_039595450
LinkDB
Position
17:complement(47612979..47665006)
AA seq 481 aa
MAFTTQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
NADEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVA
GAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
IFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLG
GGGYTIRNVARCWTFETAVALDSDIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYL
EKIKQRLFENLRMLPHAPGVQMQGIPEHAVQEDSGDEEEDDPDKRISIRAIDKRIACDEE
FSDSEDEGEGGRRNSANYKKLKRVKTEEEKDGEEKKDVKEEEKAKDEKTETKGAKEETKS
A
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggcgttcacgactcaaggaacaaagaagaaagtttgctattattatgatggggatgtg
ggaaactattattatggacaaggtcatccaatgaagccacatagaatccgtatgactcac
aatcttctacttaactatggactttacagaaaaatggaaatttatcgtccacataaagcc
aatgcagatgaaatgactaaataccacagtgatgactacatcaagtttctgagatcaatt
cgtccggacaatatgtcagagtacagtaaacagatgcagaggtttaatgtaggagaggat
tgccctgtgtttgatggtctttttgaattctgccagctgtctgctggtggctcagtggct
ggagcagttaaactgaacaagcagcaaaccgatattgctgtcaactgggctggaggatta
catcatgctaagaaatcagaagcttctggattttgttatgttaatgatattgtacttgca
atccttgaattgttaaagtatcatcagagggtcttgtatattgacattgatattcaccac
ggagatggggtggaagaagctttttacacaacagaccgtgtcatgacagtgtcatttcat
aaatatggagaatatttcccgggaactggagacctcagggatattggtgcaggcaaaggc
aagtactatgccgtgaattatccactgagagatggcatagatgatgagtcttatgaggcc
atatttaaaccaattatggcaaaagtgatggaaatgtatcaaccaagtgcagttgttctt
cagtgtggtgctgattctttatcaggagatcggcttggttgcttcaacttaactattaaa
ggccatgctaaatgtgtagaatacatgaagagctttaatctgcctttgctgatgcttgga
ggaggtggctacactattcgaaatgtagcacgttgttggacatttgaaactgcagtagcc
ttggattctgatattcctaatgaattgccatacaatgactattttgaatattttggacca
gactttaaacttcacatcagtccatcaaatatgaccaatcaaaatacgaatgattacttg
gaaaagataaagcagcgtttgtttgagaacttgcgcatgcttcctcatgcccctggtgta
cagatgcagggcatcccagagcatgcagtgcaggaagacagtggagatgaggaagaggat
gatccagataaacgcatctcaattcgggccattgataaaagaatagcttgtgatgaagag
ttctcagactcggaggatgaaggtgaaggtgggcgtagaaacagtgccaattataaaaaa
ttaaaacgagtcaagacagaagaagaaaaagatggggaggagaagaaagatgttaaagaa
gaagaaaaagcaaaagacgaaaaaacagaaactaaaggagcaaaagaggagacgaaatct
gcataa

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