Polypterus senegalus (gray bichir): 120517382
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Entry
120517382 CDS
T08668
Symbol
zgc:86896
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04144
Endocytosis
psex04517
IgSF CAM signaling
psex04530
Tight junction
psex04810
Regulation of actin cytoskeleton
psex05100
Bacterial invasion of epithelial cells
psex05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120517382 (zgc:86896)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120517382 (zgc:86896)
09144 Cellular community - eukaryotes
04530 Tight junction
120517382 (zgc:86896)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120517382 (zgc:86896)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120517382 (zgc:86896)
05100 Bacterial invasion of epithelial cells
120517382 (zgc:86896)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120517382 (zgc:86896)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psex04812
]
120517382 (zgc:86896)
Membrane trafficking [BR:
psex04131
]
Others
Actin-binding proteins
Arp2/3 complex
120517382 (zgc:86896)
Cytoskeleton proteins [BR:
psex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
120517382 (zgc:86896)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
Beta-prop_WDR3_1st
ANAPC4_WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_WDR3_2nd
WDR55
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
EIF3I
Beta-prop_TEP1_2nd
Rax2
Tricorn_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
PEP5_VPS11_N
SH3_3
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
120517382
NCBI-ProteinID:
XP_039595599
LinkDB
All DBs
Position
17:complement(79704845..79750902)
Genome browser
AA seq
357 aa
AA seq
DB search
MSLYSFGLDPISCHAWNKDRTQIAISPNNHEVHIYQKNGKEWVKIHELREHNGRITGIDW
APVSNRIVTCASDRNAYVWSLKDGVWKPTLVLLRINRAATCVKWSPQENKFALGSGAQII
SICYFEKENDWWLSKHIKKSIRSTVLSLDWHPNNILLAAGSSDFQCRIFSTYIKEIEEKP
GATAWGSKMPFAEMMFEHGDSGGWVHSVCFSPSGDSLAWTSHNSTVNVADANKGKSITQF
KTEFLPLLCLLYVSETEIVAAGHDCSLFQFSYTAPDNLEFVGKIDGQKQNLKGNVSAMQH
FRNLDKKATKENENTDLETVHQNSISQLCIVEGDKSKVTKFSSIGMDGAMVIWDFKL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtctctttatagctttgggcttgatcctatatcctgccatgcttggaacaaagatcga
actcaaattgccatcagtcctaacaaccatgaggtccacatttatcagaaaaatgggaag
gaatgggtaaaaatccatgaactaagagaacataatggtcgcataactggtattgactgg
gctccagtatctaaccgcatagtgacatgtgcttcagaccgaaatgcatatgtatggagt
ctaaaagatggagtgtggaagccaactcttgtactattgcgaattaacagggctgccacc
tgtgttaaatggtctccccaagaaaataagtttgctctgggcagtggggctcagattatt
tccatctgctactttgaaaaagaaaatgactggtggctaagcaagcatattaagaaatcc
atcagatccacagtattgagtctagattggcaccccaataacattcttcttgctgctgga
tcctcggactttcagtgcagaatattttcgacttatatcaaggagattgaggagaagcct
ggggccactgcttggggtagcaagatgccatttgcagagatgatgtttgagcatggtgat
agtggagggtgggtgcacagtgtttgtttctctccttcaggagactccttggcatggacc
agtcacaacagcactgtcaatgttgctgatgcaaacaaaggcaagagcattactcagttc
aagacagaatttctccctctcctgtgcttgctttacgtcagtgaaacagaaatagttgca
gcgggtcatgattgcagtctatttcagttttcttatactgcaccagacaatttagagttt
gttgggaaaattgatggccagaagcagaacctgaagggaaatgtatcagctatgcaacac
ttccgtaatctggataagaaagcaaccaaagaaaatgaaaacactgatctggagacagtg
catcagaacagcatcagtcaattatgcattgtggaaggagataagtcaaaggtcaccaag
ttcagtagcattggtatggatggagctatggtcatctgggatttcaagctctaa
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