Polypterus senegalus (gray bichir): 120517390
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Entry
120517390 CDS
T08668
Name
(RefSeq) LOW QUALITY PROTEIN: speckle-type POZ protein
KO
K10523
speckle-type POZ protein
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120517390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120517390
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120517390
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GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
120517390
NCBI-ProteinID:
XP_039595614
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Position
17:388890..397231
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AA seq
373 aa
AA seq
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MSRVPSPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSGA
NDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQR
AYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKV
PECRLADELGGLWENSRFTDCSLCVXGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRV
EINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVEN
AAEILILADLHSADQLKTQAVDFINYHASDVMETSGWKSMVVSHPHLVAEAYRSLASAQC
PFLGPPRKRLKQS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagagtgccaagtcctcctcccgcagaaatgtccagcgggccggtggcagagagc
tggtgttacacgcagatcaaagttgtcaagttctcctacatgtggaccatcaacaacttc
agcttctgccgggaggagatgggcgaggtgatcaagagctcgaccttctcgtcgggagcc
aatgacaagctgaagtggtgtctgagggtcaatcccaaggggctggacgaggagagtaag
gactacctgtccttgtacctgctgctcgtcagctgtcccaagagcgaagtccgggccaag
ttcaagttctccatcctcaacgccaagggggaggagacaaaggcaatggagagccagcgg
gcataccgcttcgtgcagggcaaggactggggcttcaagaagttcatccggagagacttc
ctcctggacgaggccaacgggctgctgcccgacgataagctcaccctcttctgtgaggtc
agtgtggtgcaggactcggtgaacatctctgggcagaacaccatgaacatggtgaaggtg
cccgagtgccgcctggcagatgagctcggaggattgtgggaaaactcgcgcttcacggac
tgctccctgtgtgtgngcgggcaggaattccaggcccacaaggctattctggcagcccga
tcaccagtgtttagtgccatgtttgagcacgagatggaggagagcaagaagaaccgagtg
gagatcaacgacgtggagcccgaggtcttcaaagagatgatgtgcttcatttacacgggc
aaggcgcccaaccttgacaagatggcagacgacctgctcgccgccgcagacaagtatgcc
ctggagcgcctcaaggtgatgtgcgaggatgccctctgcagtaacctgtcggtggagaac
gcggccgagatcctcatcctggcggaccttcacagcgccgaccagctcaagactcaggcg
gtggacttcatcaactaccacgcctcggacgtcatggagacctctggctggaagtccatg
gtggtgtcgcaccctcaccttgtggccgaagcgtaccgctcattggcatcagcacagtgc
cccttcctgggccccccgcggaagcggctgaagcagtcctaa
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