Polypterus senegalus (gray bichir): 120517542
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Entry
120517542 CDS
T08668
Name
(RefSeq) rab11 family-interacting protein 4A-like isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120517542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120517542
Membrane trafficking [BR:
psex04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
120517542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_9
EF-hand_6
EF-hand_1
bZIP_1
Leu_zip
DUF2937
DUF4852
Motif
Other DBs
NCBI-GeneID:
120517542
NCBI-ProteinID:
XP_039595873
LinkDB
All DBs
Position
17:complement(84764552..84905992)
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AA seq
634 aa
AA seq
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MDGNGFPDQEQLLQFLTKLKEVFDVCDEDADGYIRVEHFIDLGSQFGQGDEVEKLARYLD
PNELGRVNFKDFCHGVFAIKGCEEILKNALAIRNGTCRPCEVDYRGYTYQRGEVVLGPPY
LACNQPFRDCELFSSDHTMTLAQHNAHHESDMDSAIESTHGSEASDISRGEDKDEGLGGL
FLSGEKCLQLSSLAPSDLSTHSTTSLISNEEQFEDYGEGEDVDYSPSSPCADDETRTNGF
SDLGSSVSSSAGQTPRKMRHNYNSELLDIYCSQCCKKVNLLNDLEARLKNLKGNSPNRKI
SSTAFGKQLLHNSNFSSSNGSTEDLFRDSIDSCDNDITVKVSHLEKKVTELENDSLVNGD
LKSKLKQENTQLVHRVHELEEQIKDQEARAEQNLEEEIKRHREAYTKLEREKGIEIELLS
NRVQQLEEENSEMKATVTRLKSQTEKLDEEKQRMTDKLEDTSLRLKDEMDLYKKMMDKLR
QNRHEFQKEREATQELIEDLRRELEHLQMFKLETERPGRGRSSSSSLSEYNAKTREMELE
YEIKRLKLENQKLREQNDDLNGQILSLSLYEAKNLFATQTKAQSLAAEIDNASRDELMEA
LKEQEEINFRLRQYMDKIILAILDHNPSILEIKN
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggacgggaatggcttcccggaccaggagcaactgctgcaatttttaaccaaactgaag
gaggtgtttgatgtatgcgatgaagatgccgatggctacattcgtgtcgagcatttcata
gacctgggctcccaatttggacaaggagatgaggtggaaaagcttgccaggtacctggac
cccaatgagttgggcagagtgaacttcaaggacttttgccatggtgtattcgccataaag
ggctgtgaggagattttgaagaatgctttggccattagaaatggcacatgtcggccatgt
gaagtggactacagaggctacacttatcagcgtggagaggttgtcttgggtcctccctat
ctggcatgcaaccagccattcagagactgtgaacttttttctagtgatcacaccatgaca
ctagcccagcacaacgcccaccacgagtcagacatggacagtgccatcgagagcacacat
ggctcagaagcatcagatatctcccgtggagaagataaagatgaagggcttggaggcctc
ttcctttcaggagagaaatgtctccagcttagctctttagcgccctcggacctgtccaca
cattctacaacatcgctcatcagcaatgaagaacagtttgaagactatggtgaaggagaa
gatgtggactacagtcccagtagcccttgtgctgatgatgaaaccagaaccaatggcttt
tcagatctgggatcatctgtgtcttcaagtgctggccagacccctagaaagatgagacat
aattataatagtgaattacttgacatctactgttcacaatgctgcaagaaggtcaatctc
ctgaatgacttagaagccagactcaagaacctgaaaggcaacagtccaaatcgcaaaatt
tccagcactgcttttgggaaacagctgctccacaacagcaatttcagcagcagcaatggc
agcacagaggacttgttcagagatagcatagattcctgtgacaatgatataaccgtgaag
gtgagtcatttggaaaagaaagtgacagaactggaaaatgacagcttggtcaatggagat
ttgaagagcaaactgaaacaggaaaatacgcagcttgtacacagagtacatgagcttgag
gagcagataaaagaccaggaggcacgagcagaacagaacctggaggaggaaatcaaaaga
cacagagaagcctacactaagctggaacgagaaaagggcattgaaattgaacttctcagt
aacagggtacaacagctagaagaggagaacagcgagatgaaagccactgttactagactg
aagtcacaaactgaaaaactggatgaggaaaagcaaaggatgacagacaagcttgaagac
acaagccttcggttaaaagatgagatggacttgtacaagaaaatgatggacaagttgaga
caaaacaggcatgaatttcaaaaagagagagaggccacacaagagctcatcgaagatctc
cgcagagagttggaacatctgcagatgttcaaattagagacggaacggccaggccgaggc
agaagttcatcatcaagtctttcagagtacaatgccaaaactcgggagatggaactggaa
tatgagatcaagcggctgaaactggagaaccaaaagcttcgggagcagaatgacgacttg
aatggacagattctcagcctcagtctgtatgaagccaagaatctctttgcaactcaaacc
aaagctcagtccctagctgcagaaatagacaatgcatcacgggatgagctgatggaggct
ctgaaggaacaagaagaaattaactttcgcctacgtcaatacatggacaagatcatcttg
gcaatcctggaccataatccgtccatactggaaattaaaaattag
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