Polypterus senegalus (gray bichir): 120517590
Help
Entry
120517590 CDS
T08668
Symbol
grin2cb
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04020
Calcium signaling pathway
psex04080
Neuroactive ligand-receptor interaction
psex04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120517590 (grin2cb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120517590 (grin2cb)
04082 Neuroactive ligand signaling
120517590 (grin2cb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psex04040
]
120517590 (grin2cb)
Ion channels [BR:
psex04040
]
Ligand-gated channels
Glutamate (ionotropic)
120517590 (grin2cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
DUF6855
Motif
Other DBs
NCBI-GeneID:
120517590
NCBI-ProteinID:
XP_039595930
LinkDB
All DBs
Position
17:101420020..101471301
Genome browser
AA seq
1370 aa
AA seq
DB search
MGFPLGWLRASLWLLLWGVRGSLARAFGVPAVNVAVVFGGPSYQMEIKGRLSRENFLDLP
LEVNPVTVIINDTNPRALLTRICDTLAATHIHGMVFEDNIGTEAVAQILDFISSQTSVPI
VGISGGSAVVLTPKEQGSTFLQLGSSVDQQIGVIFKVMEEYDWGSFAIITSQYPGYQDFI
EYIESFIDTSYFGWELQDILSFDMSYESSSSTRVGRMLRQVDAQVLIVYCSHDEAQYLFA
VAAEAGLIGPGYIWIIPSLAVGSMDVATPDIFPVGLISVLTDRWKMSLRQRVRDGVAVVV
KGVQSFMRQHGYVPEGHTDCRSPAVSSHNDTFYRHMLNVTWEQKDFSFNSDGYLVNPSMV
IITLNRERQWEKVGTYEQGIIQMRYPVWPRYGTFLEPVSDNRHLTVATLEERPFVIVENV
DPITRTCVRNTVPCRKQSNRTDSFIATSEPYGKLCCKGFCIDILKKLARTIKFSYDLYLV
TNGKHGKKVKGVWNGMIGEVYYKRADMAIGSLTINEERSEIIDFSVPFVETGISVMVARS
NGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFIFEYFSPVGYNRCLTSAKNPGGPTFT
IGKSIWLLWALVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYID
TVSGLSDKKFQKPQEQYPPFRFGTVPNGSTERNIRSNYPDMHTHMIKYNQRTVEDALNSL
KTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSKWKRPVDLALL
QFLGDGDTQKLQTVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHL
LYWKLRHSVRKSNRLDFLLAISRGIYSCFSGVEDVESPIHIRNPDLTTSYAQANMLKMLQ
TAKDIVSSAKVENSLENATRTIESWARRSENIKGGLGGRGPLAAASDSVASAIRLPYISS
ITENHSPFNPALTIHSEENGSRPLAEKQRGIARPTPIRYTLPARGSPLYDRTLPISSLSS
PQIGMRESAPLIAPHPSSRLYVDDRHRHPGSPFVPYRELQLPDIYSEQGEPASRKVAADG
LMRKKRAQAYVAESPAMRRRPGAREPIRGFAELCANHLTENHLPTGPGTSSPYPRANSNC
NSCLKAHPEPEGVPLLGKEKLARRASFIKATWGHSDKLRPLEDKGAFPCGRMNVPDLFPR
VALNNKARGAGYCCPLPTDHANGRAHPCKEPKLRYSQSTRLPSYREAVLQNAAALRRSST
VVHRHYSAYLNSFTNLPVYVGPLTQGPPHFYGQPKDVCGLFPYMGHYPDEHGFIPRCGGR
RLVYDDEEEYGRYDGSRGRGDRRQVLVARRVNSPFVPKPWGRVSSLESEV
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgggctttcctttgggctggctgagagcctccctgtggctgctgctctggggtgtccgt
ggcagcctggcccgagcatttggagtgccagcagtcaatgtggcagtggtatttggaggt
ccttcttaccagatggagattaagggaaggctgagccgtgaaaacttcttggatttgcca
ctagaggtgaacccggtcactgtcatcatcaatgacaccaacccgcgggccttgctgaca
cggatatgtgacactctggctgccacgcacatccacggcatggtgtttgaggataatatt
ggaacggaagccgtcgcccagattttggacttcatctcttcacagacgtctgtcccaatc
gtgggcatcagcggagggtctgccgtggtgctgacacccaaggaacaagggtcgactttc
ctgcagctgggctcctctgtggaccagcagattggtgtcatcttcaaagtgatggaggag
tacgactggggctccttcgccatcatcaccagccagtacccgggctaccaggacttcatc
gagtacatcgagtccttcatcgacacgagttactttggctgggagctgcaggacatcctg
agcttcgacatgtcctacgagagcagcagcagcaccagggtgggccggatgctgagacag
gtggacgcccaggtgctgatcgtttactgctcccacgacgaggcccagtacctgtttgcc
gtggcagccgaggcgggtctcatcggccccggctacatctggatcatcccgagcctggcg
gtgggcagcatggacgtggcaacgccagacatctttccggtcgggctcatcagcgtcttg
acggaccgctggaagatgagcctaagacagcgcgtgcgggatggcgtggccgtcgtggtg
aagggcgtacagagcttcatgaggcagcacggctatgtgccggaagggcacacggactgc
cgctcccctgctgtgtcatcccacaatgacaccttctacaggcacatgctaaatgtcacc
tgggaacagaaggacttctcctttaacagcgatggctacctggtgaacccatccatggtg
atcatcactctcaaccgagagcgccagtgggagaaggttgggacgtacgagcagggaatc
attcagatgaggtatcccgtgtggccaaggtatggcacattcctcgaacctgtgtcagac
aaccgccacctgaccgtggccaccttggaggagaggccttttgtcattgtggagaatgtc
gacccgatcacgaggacctgcgtcaggaacaccgtgccctgccggaagcagtccaaccgc
acagacagctttattgccacgtcagagccgtatggcaaactctgctgcaaaggcttctgc
atcgacatcctcaagaagctggccaggaccatcaagttctcgtatgacctctatctggtc
accaatggcaaacacggaaagaaggtcaaaggggtctggaatggcatgattggagaggtg
tactacaagcgtgctgacatggctattggctccctgacaatcaacgaggagcgatcggag
ataatcgacttctctgtgccctttgtggagactggaatcagcgtaatggtggccagaagt
aatggcacagtctcgccatctgccttcctggagccgtacagcccggcggtgtgggtcatg
atgttcgtcatgtgtctcacggtggtcgccatcactgtcttcatctttgagtacttcagt
ccagtcggctacaaccgttgtctcaccagcgccaaaaaccccggaggcccgacgttcaca
atcggcaagtccatctggctgctctgggccctcgtgttcaacaattcagtccctattgag
aaccctaaaggcacaaccagtaagattatggtgctagtctgggcattctttgcagtcatc
tttctcgccagttacactgccaacctcgctgccttcatgatccaagagcagtacatcgac
acagtgtctgggctgagcgacaagaagtttcagaagccccaggagcagtacccgcctttc
cggtttggcaccgttcccaatggcagcaccgagaggaacatccgcagcaattaccctgac
atgcacacccacatgatcaagtacaaccagcgcacggtcgaggatgccctcaacagcctc
aaaaccgggaagttggatgccttcatctatgacgcagctgtgctcaactacatggctggc
aaggacgagggctgcaaactggttacaattggcagcgggaaggtgtttgccaccacgggc
tatggcatcgcgctccagaaggactctaaatggaagcgtcctgtggacctggctctcctg
cagttcctcggcgacggtgacacccagaagctgcagacggtatggctgtccgggatctgc
cagaatgagaagaacgaagtgatgagcagcaagctggacatcgacaacatggctggcgtc
ttctacatgctgctggtggccatggggctcagtctgctggtcttcgcctgggagcatctg
ctgtactggaaactgcggcactcggtccgcaagtccaaccgcctcgacttcctgctggcc
atcagtaggggcatatacagctgcttcagcggagtcgaggacgtggagagcccgattcac
atccgcaacccggacctcaccaccagctacgcccaggccaacatgctcaagatgctgcag
acggccaaggatatcgtgtcttcggccaaagtggagaactccctggagaacgccacgcgg
accattgagagctgggcacggagaagtgaaaacatcaaagggggcttgggaggacgcggg
cccctggcagcagcctccgattcagtcgccagtgccatccggcttccttacatttccagc
atcacggagaaccactcgcccttcaatccggccctgaccatacactctgaagaaaatggc
agccggccgttagcggagaagcagaggggcatcgcccggcccactcccatccggtacacg
ttgcctgcccgggggagcccactgtatgacaggacactgcccatctccagcctgagcagc
ccccagattggcatgagggagtctgccccgctgatcgccccacacccctccagccggctc
tatgtggacgatcgccaccggcaccctggctctccgtttgttccctaccgggagcttcag
cttcccgacatttacagtgaacagggtgagcccgcctcccggaaagtggccgccgacggc
ttgatgcgaaagaagagagcgcaggcgtacgtggccgagtctccggcgatgaggaggcgg
cctggggcgcgggagccaatccggggctttgctgagctgtgtgccaaccacctcacggag
aaccacctaccgacggggccgggcacgagcagcccatacccaagagccaacagcaactgc
aactcgtgcttgaaggcccacccggagccagagggggtcccactcttggggaaggagaag
cttgcccgtcgtgcctcctttatcaaggctacatgggggcacagtgacaaattgagaccc
ctggaggacaagggtgcctttccttgtgggaggatgaatgtgcccgacttgtttcccagg
gtggcactgaacaataaagccagaggagctggctactgctgcccacttcccacagaccat
gccaacggccgcgcccatccctgcaaggagccgaagctgaggtactcgcagtccacccgg
ctgccgtcctaccgagaggccgtgctgcagaatgcggccgccctccgccgctcgtccacg
gtggtccacaggcactactcggcctacttaaactccttcaccaacctgcccgtctacgtg
ggccccctcacgcaggggcctccccacttttatgggcagcccaaggacgtgtgtggcctc
ttcccctacatggggcactaccccgacgagcacggcttcatcccccggtgcggcggcagg
cgcctggtttacgacgacgaagaggagtatgggcgctatgacggcagccgggggcgagga
gaccgcaggcaagtactcgtcgcccggagggtgaacagcccgtttgtgccaaagccctgg
gggcgagtgtcgagtctcgagtcggaggtctga
DBGET
integrated database retrieval system
