Polypterus senegalus (gray bichir): 120517671
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Entry
120517671 CDS
T08668
Symbol
eme1
Name
(RefSeq) crossover junction endonuclease EME1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03440
Homologous recombination
psex03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120517671 (eme1)
03460 Fanconi anemia pathway
120517671 (eme1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psex03400
]
120517671 (eme1)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
120517671 (eme1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EME1-MUS81_C
ERCC4
TMEM214
Motif
Other DBs
NCBI-GeneID:
120517671
NCBI-ProteinID:
XP_039596039
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Position
17:complement(101301897..101317032)
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AA seq
587 aa
AA seq
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MNSEQDQPQCSAPGPDGDGEDLPVFTFLQKQLALAHENAAPELLVLESSDSDSSCCFPVG
TLQDPLKPTEDVTMISSESDDEDVYVPLSERLKERFGAKDADVCGPLDTPLQSDNAELQN
QSENFAQSLNKNNEQVTGAVRQTHMVGKASVWDISDSEDEAGTLRLMEGPGPSSTSAGKP
PFTGLKSGLSSPVKKRLVKCNQEEVEEKRLLTLQKKKEREKQRAERETKKHEIERERAKK
KALAEAVRAMKPEECIKNLLVDLLVAIDPALLQVEGGGQLLTLLQSLNYNYVVESQAVPC
SVTWKRRTHLTEAGETQYASEANVVVLVPTEDFISMILCSSEERQGISTSGRQSLKSWAR
KILEHFGKKTLTVAVVNLETYFRSQKCQSQRRFREEVLGDGDAGSKRRKRKAGEDVLPKV
SRVEVEEALVDLQLLTDVQVHLSESWKAFSDYVAMVSKAVAETPFKRQRDQASFNFYLDG
EWAGGCKVDRNGRGLLQVWKRQIQQFNRVSPEIASAILAAFPSPQSLVKAYRKCSSEAER
QRLLADVQVRRGEGVTATSRRIGPELSKRVYLLLTSCDPELSLEAAG
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtgagcaggatcagccacaatgcagtgcccccggtccagatggtgatggcgag
gacttgcccgttttcacctttctgcagaagcagctggcactagcacatgaaaatgctgct
ccagaactgcttgtactggagagctcggactctgacagctcttgctgtttccctgttgga
acacttcaggaccccttgaagcctacagaagacgtcacgatgatcagcagtgaaagtgat
gacgaggatgtctatgtgcctctttcagagaggctgaaagagagattcggagcaaaagat
gctgacgtgtgcggccccctagacactcctctgcagagcgacaacgctgaattacaaaat
caatccgagaattttgcgcagtcacttaataagaataatgagcaagtaactggcgcagtg
aggcaaacgcatatggttggcaaggcgtccgtttgggatatatccgactccgaagacgag
gctggaactctaaggttaatggaaggcccaggtccgagtagcacttcagctggcaagcct
ccattcactggcctgaaatccggtctctcgtccccagtaaaaaagcgtctcgttaaatgt
aaccaagaagaggttgaagaaaagaggcttcttacgctgcagaagaaaaaggagcgggaa
aagcagcgggcagagagagaaacgaagaaacacgagattgaacgagagcgagcaaaaaag
aaagctctggctgaagcggtcagggcaatgaaaccagaagaatgtataaagaatctgtta
gtcgatcttttagtcgcgattgatccagctttgctgcaggtagaaggcggaggccaattg
cttactctgttacagtccttgaattacaactatgtggtggagagccaggctgtgccgtgc
agcgtcacttggaagaggagaacgcacttgaccgaggctggagagacgcagtatgccagt
gaggccaatgtggtggttcttgtgccgacggaggatttcatttccatgatcctgtgctcc
tcggaggaacgccagggcatctctaccagcggcaggcaatctttgaaaagctgggcacgg
aaaatattagagcactttggaaagaagaccctgacggtggccgtggtgaacctggagacg
tacttcaggtcacagaagtgtcagagccagcggaggtttcgcgaggaggtactcggtgac
ggtgacgctggcagtaaaaggaggaagagaaaagcaggtgaagatgttctccccaaggtc
tccagggtggaagtggaagaggcgctggtggatctgcagttgctcacagatgttcaggtt
cacttgtccgagtcctggaaggccttctccgattacgtggcgatggtgtccaaggccgtc
gctgaaactccttttaagcgccaacgtgaccaggcaagcttcaatttctacttggatggc
gagtgggcaggaggatgcaaagtggaccggaatggcagggggcttctccaggtgtggaag
aggcagatccagcagttcaatcgcgtcagccctgaaattgctagtgccatcttggcggcc
ttcccatcaccccagtcactcgttaaggcctaccggaagtgcagctccgaggcggagagg
cagagacttcttgcagacgtgcaggtccggcgaggagaaggagtgacggcgacttcacgc
cgcatcggacccgaactttccaagcgcgtttatttgctgctgacgtcatgtgacccagaa
ctgtccctggaggctgctggttag
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