Polypterus senegalus (gray bichir): 120517750
Help
Entry
120517750 CDS
T08668
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120517750 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psex03021
]
120517750 (smarcd2)
03036 Chromosome and associated proteins [BR:
psex03036
]
120517750 (smarcd2)
Transcription machinery [BR:
psex03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120517750 (smarcd2)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120517750 (smarcd2)
PBAF complex
120517750 (smarcd2)
GBAF(ncBAF) complex
120517750 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
120517750
NCBI-ProteinID:
XP_039596149
LinkDB
All DBs
Position
17:complement(250421..257109)
Genome browser
AA seq
485 aa
AA seq
DB search
MASRGGYPMSAAPGGLRVPPSVQQSPAFRAVGPSSASPSPFQQRPGMSPSRAMPMGLGTI
PGPSFGAGPPMRAGIPQSGMDPFRKRFLQQQQGLANQRKGLKRRKMADRILPQRIRELVP
ESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPITQKRKLRIYISNTYTPGKAEGEEAEG
ISSWELRVEGKLLEDPGKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRMPTTQETDGF
QVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRASIMQALWLYIKTNKLQD
GHEKEYINCNRYFRQIFSCTRMKFSEIPMKLASLLQHPDPIIINHMISVDPNDQKKTACY
DIDVEVDDPLKGQMSGFLSSTTKDQEIAALEMKIHETIESINQLKIQRDFMLSFSGSPQE
FIQDWLKSQCHDLKLMTDITGNAEEERRTEFYEASWAQEAVGRYIFSKVQQRRQELEQVL
GIRLT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaggggagggtacccgatgagcgcggcgcccgggggtctccgagtgcccccc
agtgtgcagcagagtccggcattccgagccgtggggccctcctccgcctcgccttccccc
tttcagcagcgcccggggatgtcccccagtcgtgccatgccaatgggtttgggcacaatc
cctgggccctcctttggagccgggcctcccatgagagctggcatcccgcagtctggaatg
gatcctttccgcaagaggtttctgcagcagcagcagggactggccaaccaacggaagggt
ctcaagcgacgcaagatggcagaccgaatacttcctcagcggattcgagagttggttcct
gaatcccaggcctacatggacctgctggccttcgagcgcaaactggaccagaccatcgcc
cgcaagcgcatggagatccaggaggccatcaagaagcccatcacgcaaaagcgcaagctg
cgcatctacatctcgaatacgtacaccccgggcaaagcggagggcgaggaggcagagggc
atctcgtcgtgggagctccgggtggaagggaaacttctggaagacccaggaaagcagaag
aggaagttctcgtccttcttcaagagcctggtgatcgagctggacaaggacctctacggg
cccgacaaccacctggtggagtggcatcgcatgcccaccacacaggagaccgatggcttt
caggtgaagagacccggggatgtcaacgtgaagtgcaccctgctgctgatgctggaccac
cagccccctcagtacaaactggacccccgcctggcccgcctgctgggggtccacactcag
acccgggcgagcatcatgcaggcgctgtggctctacatcaagaccaacaagctgcaggac
ggccacgagaaagagtacatcaactgcaaccgctacttcagacagatttttagctgcacg
cgcatgaagttctcggagattcccatgaagctggccagcctcctgcagcacccggacccc
atcatcatcaatcacatgatcagcgtggaccccaatgaccaaaagaagacggcctgctat
gacatcgacgtcgaggtggatgacccgcttaaggggcagatgagcggcttcctgtcctcg
accactaaggaccaggagatcgcggccctcgaaatgaagatccacgagaccatcgagtcc
atcaaccagctgaagattcagagggacttcatgttgagcttcagcgggagcccccaggag
ttcatccaagactggctcaagtctcagtgtcacgacctcaagctcatgacggacatcacg
gggaacgccgaggaggagaggagaaccgagttctacgaggcatcctgggcgcaggaggcg
gtcggcaggtacatcttctccaaggtccagcaacgcaggcaagaactggagcaggtgctg
ggcatccgactcacctga
DBGET
integrated database retrieval system
