Polypterus senegalus (gray bichir): 120517863
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Entry
120517863 CDS
T08668
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120517863 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120517863 (nup85)
03036 Chromosome and associated proteins [BR:
psex03036
]
120517863 (nup85)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120517863 (nup85)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120517863 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
TPR_19
Motif
Other DBs
NCBI-GeneID:
120517863
NCBI-ProteinID:
XP_039596299
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All DBs
Position
17:86967613..87019495
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AA seq
652 aa
AA seq
DB search
MWEIEELDVEPITTVIPWVNSSKSRLGFEWGPGDMLFYETVKGGGPKGKVCPLIHVVRKD
EEMYSPILRKLFNESHHIFVGLQRSQEESASKPKTHQFVSISKNYRSVIRACIEELQHIA
VSSAVSALTAQDYNQISILLAVELIWNLCEILFIEAAPAGTLLLHLLDWVQVHNAGVDDE
AQELLHSEDPAQHPKFWDVVICYVLQGRIQEARQLLAKQATQKPAASSMFKTMDGLLKKM
PVFNPSGNQTLTEFELKWGHWHEECNRHLEDSSFASNSNMETVCKILLGDKDTLLSQKKH
LTNWYHFLVTQLLYTHPAVKPQDLQYYAQECMDMFLKNQIEPEPLDSILLAAFKFDILQV
IKDCSIALNNWWFVAHLTDLLDHCRLLQSHNLHFGSNLREFLLLEYASGLFTHHSLWQLA
VDYFDYCPEFGKAYLELHIERVSLDTERKALKVLRICEQRQMTEQVRSICKIMAKKSLHN
NRLGSALSWSIRAKDAGFATLISDRFLEDYCSRGSFSDLELIDNLGTSMLLSDRLTFLGK
YCEFHRLYGEKRFTEAAKLLLSLMTARLAPRSFWMTLLTDALPLLEQKKVIFSAEQTYEL
MQCLEELTSSDQNEHPSEQEDDIEITKVELLRLALARNLASAIVQEGSVNAF
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaaattgaggagttggatgtcgagcctatcactacagtaattccatgggttaac
tccagtaagagccggctagggtttgaatggggtccaggagacatgctgttttacgagact
gtaaaaggtggtggtcccaagggtaaagtatgcccactaattcatgttgttaggaaggat
gaagaaatgtattctccaatccttaggaaactctttaatgaatcccatcacatttttgtg
ggcttacagaggagtcaagaggaatctgcaagcaaaccaaagacccatcagtttgttagc
ataagtaagaattacagatctgtcattcgagcctgcattgaggaactacagcatattgca
gtttcatcagcggtttctgctttaacagcacaagattataaccagatttccattcttctg
gccgtggaattaatctggaatctgtgtgagattcttttcattgaagcagcccctgctgga
actctccttctacacctcttggattgggtgcaggtgcacaatgcaggtgtagatgatgaa
gcacaagagttgttgcatagtgaggaccctgcacaacatccaaaattttgggatgtggtc
atttgctatgtgctacaaggtcgaatacaagaagctcgacagttacttgccaaacaagct
acccagaagcctgctgcctcaagcatgtttaaaactatggatgggctgttgaagaagatg
cctgttttcaatcccagtggaaaccagactttaacagagtttgaactaaagtggggacac
tggcatgaggagtgtaatcgtcacttagaggacagttcctttgcatctaattctaacatg
gaaactgtttgcaagattttgttaggtgataaagacaccttattgagtcaaaaaaagcat
ttgaccaactggtaccactttctggtaacacagcttttgtacacccacccagctgtcaag
ccccaggatcttcaatattatgctcaggagtgcatggatatgttcttgaaaaaccagatt
gaaccagagccactggacagcattctgctagctgcctttaagtttgacattctgcaggtt
atcaaagactgcagcattgctctaaataactggtggtttgttgctcacctgacagacctt
ctggatcactgcagattgttacagtctcacaacctccactttgggtctaatctccgagaa
tttctgcttctagaatatgcttctggacttttcacacatcacagcttgtggcaattggca
gttgactactttgattactgcccagagtttggaaaggcatacctggagctgcatattgag
agagtttctctggacaccgagcgaaaggcgctaaaggtgctgcgcatttgtgagcagaga
cagatgactgagcaagtacgcagcatatgcaagatcatggctaagaagtcactccacaac
aaccgcctgggctcagccttgtcttggagcattcgagcgaaagacgctggctttgccact
ctcatctctgacagattcttggaggattactgttctcgaggctccttctctgatcttgag
ctcattgacaacttaggaacgtcaatgctactgagtgacaggctcacatttctgggaaag
tactgcgagtttcacagactgtatggtgaaaagcggttcacagaggctgcaaaactgctg
ctgtctctcatgacagccagactggcccctcgcagcttctggatgactctcctaactgat
gcacttcctctgttggagcaaaaaaaggtgatattttcagctgaacaaacatacgagtta
atgcagtgtctggaggaactgacatcttctgaccaaaatgaacatccatctgagcaggaa
gatgacattgagatcactaaagtagagcttctgcgtctggcacttgcacgaaatctggca
tcagccattgtccaggagggttcagtaaatgctttttag
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