Polypterus senegalus (gray bichir): 120517902
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Entry
120517902 CDS
T08668
Name
(RefSeq) elongation factor 1-alpha, oocyte form-like
KO
K03231
elongation factor 1-alpha
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120517902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120517902
03016 Transfer RNA biogenesis [BR:
psex03016
]
120517902
03012 Translation factors [BR:
psex03012
]
120517902
04131 Membrane trafficking [BR:
psex04131
]
120517902
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psex04147
]
120517902
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120517902
Transfer RNA biogenesis [BR:
psex03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
120517902
Translation factors [BR:
psex03012
]
Eukaryotic type
Elongation factors
120517902
Membrane trafficking [BR:
psex04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
120517902
Exosome [BR:
psex04147
]
Exosomal proteins
Proteins found in most exosomes
120517902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
120517902
NCBI-ProteinID:
XP_039596348
LinkDB
All DBs
Position
17:20168984..20173133
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAGGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEITKEVSAYIKK
IGYNPATVAFVPISGWHGDNMLEPSSNMPWFKGWKIERKEGAASGVTLLEALDSILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKPGMVVTFAPANITTEVKSVEMHHESLA
EALPGDNVGFNIKNVSVKDIRRGNVAGDSKNDPPMEAGTFTAQVIILNHPGQIGPGYAPV
LDCHTAHIACKFATLKEKIDRRSGKKLEDEPKFLKSGDAAIVEMVPGKPMCVESFSDYPP
LGRFAVRDMRQTVAVGVIKSVEKKASSGGKVTKSAVKASKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggagaagatccacattaacatcgtcgtcattggacacgtcgactctggtaaa
tccaccaccaccggccatctcatttacaaatgtggcggtatcgacaagaggaccatcgag
aaattcgagaaggaggcggctgagatgggtaagggctccttcaagtatgcctgggtgttg
gacaagctgaaggctgagcgtgagcgtggtattaccattgacatctctctgtggaagttt
gagaccagcaaatactatgtcaccattattgatgcccctggccacagagatttcatcaag
aacatgatcactggaacctctcaggctgactgtgcggtgctgattgtcgctgggggtgtt
ggtgagttcgaagccggtatctccaagaatgggcagacccgtgagcatgctctcctggcc
tacaccctgggagtgaaacagctcattgttggtgtgaacaaaatggactctactgaacca
ccatacagccagaaacgttacgaggaaattacaaaggaagtcagtgcctacatcaaaaag
attggctacaaccctgccactgtggcctttgtgccaatctccggctggcacggagacaac
atgctggagcccagctcaaatatgccctggtttaaaggatggaagattgaacgcaaggag
ggtgctgctagcggtgtgactctgctggaggccctagattccatcctgcctccttcccga
ccaacagacaagccattgcgtctgccccttcaggatgtctacaagattggaggtattgga
acagtgcccgtgggtcgtgtggagactggaaccttgaagcccggtatggtcgtcacattt
gctcctgccaacataaccactgaagtaaaatctgtggaaatgcaccatgagagtctggca
gaagctcttccaggagacaatgttggtttcaacatcaaaaacgtatctgtaaaggatatc
cgtcgtggaaatgttgccggagacagcaaaaatgacccacccatggaggctggcaccttc
actgcacaggttatcatcctgaaccacccaggccaaattggaccaggttatgcaccagtg
ctggattgccacactgctcacattgcctgcaagtttgccactctgaaggaaaagattgac
cgtcgttctggcaagaagctggaagatgagcccaaattcttgaagtctggtgatgctgcc
attgtagaaatggttcctggcaagcccatgtgtgtggagagcttctctgactatcctcct
cttggacgttttgctgttcgtgacatgaggcagacggttgctgttggtgtcatcaaatct
gttgagaagaaggcttccagtggtggcaaagtcaccaagtctgcagtaaaggcttctaaa
aaatga
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