Polypterus senegalus (gray bichir): 120517920
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Entry
120517920 CDS
T08668
Name
(RefSeq) polycomb protein SCMH1-like isoform X1
KO
K11461
polycomb protein SCMH1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120517920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120517920
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
120517920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
120517920
NCBI-ProteinID:
XP_039596365
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Position
17:complement(21017990..21085009)
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AA seq
692 aa
AA seq
DB search
MRRPGLQKGLEWKDGRQNKHARSGRPSITPPQYPGHFSWEKYLKECGASAAPAHCFRQCF
TPPANEFKAGMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSSEIQ
PIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPVRIFHKQEPPAPAQNYFKVG
MKLEAVDRKNPHFICPATIGEVRGVEVLVTFDGWRGAFDYYCRYDSRDIFPVGWCALTGD
NLQPPGTKVVLPKSLSIPAEGVTESPSMHPIGKGTAVQRGRKPGRRRGRQPMNWLHKGGT
AQHGMANNSKSVKPIKIPKKRGPKPGTKRKPRVVPNPAPTSPTSSTPEPDTSSVPQDNAT
IPTSALQAPTVCVYLNKSGNVGPHLDKKKVQMLPDHFGPARASVVLQQSVQACIDCAYQQ
KTVFSFLKQGHGGEVISATFDREQHTLTLPAVNSVTYILRFLEKLCHNLRSDNLFGNQPF
TLGTVVQHNSLEFECGTYIPDRKCYGESPLLVPGRGSKRYQDSPPYSAPLSPKLTKNDRH
PTEAETFQIESGLPAATEHRLDSFESPLASINSASPSRRDFRSPSFRTLTQSSSLPNSLQ
RLSSGDRFLTSRDSPRSLSRDPNLWSVDDVMQFVRDADPQLGPHAELFRKHEIDGKALLL
LRSDMMMKYMGLKLGPALKLTFHIDRLKQGKF
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggcctggtctacagaaaggtctcgagtggaaggatggcagacaaaataaacat
gcaaggagtggacgcccttccattaccccacctcaatacccaggtcacttcagctgggag
aaatacctgaaagaatgtggtgcttcagcagcacctgcacactgtttcagacagtgcttt
acaccaccagcaaatgaattcaaagcagggatgaagctagaggctcaggaccctcgcaat
acaacttctacttgcatagcaacagttgtggggttaacaggtgccaggcttcgcctgcgg
cttgatggcagtgacaacaaaaatgacttttggcgtttggttgattcatcagaaattcag
ccaattggaaattgtgagaagaatggaggcatgcttcaaccacctttgggtttccgactg
aatgcttcttcttggcctatgtttcttttaaaaacactaaatggagcagagatggcacca
gtccgaatatttcataagcaggaacctcctgcccctgcacaaaactacttcaaagttgga
atgaaactagaggcagttgatcgtaagaaccctcattttatctgccctgccaccattgga
gaggtgcgaggtgtagaggtgctggtcacctttgatggatggaggggagcctttgattat
tattgccgctatgactcacgcgacatctttccagttggctggtgtgcccttactggagat
aacctacaaccaccaggcaccaaagtagtgttgccaaagagccttagcatacctgcagag
ggtgtcacagagtctcccagcatgcaccctataggcaagggaactgcggtacaaagaggc
cgaaagccaggacgcagaagagggagacaaccgatgaactggctacataaaggaggaact
gcccagcatggaatggctaacaattccaaatctgtaaaacctattaaaattccaaaaaag
agaggacccaagccaggcaccaagagaaagccccgtgttgtgcctaatcctgcaccaacc
tcaccaaccagtagtactccagaacctgataccagcagtgtgccacaggacaatgctaca
attcccacatctgctcttcaggctcctacggtgtgtgtgtatctgaacaaaagtggcaat
gttggccctcacttggacaagaagaaagtgcagatgcttccggatcactttggcccagct
cgagcatcagtggttctgcaacagtctgtccaggcctgtattgactgtgcctaccaacaa
aaaactgtcttctcgttccttaaacaaggtcatggaggcgaagtgatttcagccacattt
gaccgagaacagcatactttgacgcttccagcagtcaacagtgttacttatattctccga
tttttggagaaactgtgccacaatttgcgtagtgacaacttatttggaaaccagccattt
acacttggcactgtcgtgcagcacaactccttagaatttgagtgcggcacatacatccca
gataggaagtgttatggtgaaagtccccttcttgttcctggtcgaggaagcaaaagatac
caggattccccaccttatagtgctcccctctccccaaaacttactaaaaatgaccgacac
cccacagaagcggaaacgttccaaatagagagtggtctccctgcagcaactgaacatcgt
ctcgacagctttgagtcacctcttgcatctataaactctgctagcccgtccaggagagac
ttccgttcgccatccttcagaacacttacacaaagcagcagtctgccaaactcattgcag
cgccttagctccggggaccggttcttaacttcacgagacagcccacgttccttaagcagg
gatccaaatctttggtcggttgatgatgttatgcagtttgttcgagatgctgatccccag
cttggaccacatgctgagcttttcagaaaacatgaaattgatgggaaggctttactcctg
ctgcgcagtgacatgatgatgaaatacatgggcctaaagttaggccctgcactcaaactc
accttccatatagacagactcaaacagggcaagttctaa
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