Polypterus senegalus (gray bichir): 120518020
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Entry
120518020 CDS
T08668
Symbol
hcrt
Name
(RefSeq) orexin
KO
K05246
hypocretin (orexin) neuropeptide
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04080
Neuroactive ligand-receptor interaction
psex04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120518020 (hcrt)
04081 Hormone signaling
120518020 (hcrt)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
psex04052
]
120518020 (hcrt)
Cytokines and neuropeptides [BR:
psex04052
]
Neuropeptides
GPCR binding
120518020 (hcrt)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orexin
LSR
Motif
Other DBs
NCBI-GeneID:
120518020
NCBI-ProteinID:
XP_039596505
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All DBs
Position
17:11115237..11121026
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AA seq
170 aa
AA seq
DB search
MSAGMLTTESLGAKRLHSSLLLLLLAILLCNCQPVPDCCRHKTCSCRIYDLLHGTGNHAV
GILTLGKRKTSSQAYQSRLYQLLHGSGNHAAGILTMGRREEEESRDDIGMEDRDPYITFP
WFPELSVQDSSVSADPTPCDHLSPQLTGPLNAEPPVQDLLRGCFVKRGEA
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccggtatgctgaccacggagtcgctgggtgccaagagactccacagctccctt
ctgttactgcttctcgccattctgctctgtaactgccagcccgtccccgactgctgccgc
cacaagacctgctcctgccgaatctacgacctccttcacggcacaggcaaccacgccgtg
ggcatattgactttgggcaagaggaaaacatctagccaggcttaccagagccggctctac
cagctcctccacggctctgggaaccacgctgcgggcatcctcaccatggggagacgggag
gaagaagagagccgagatgacatcgggatggaggacagagatccgtacatcacattcccg
tggttcccagaattatctgtccaggacagctcggttagcgccgaccctacgccgtgtgac
caccttagcccccaactcaccgggccactcaacgcggaaccccccgtgcaggaccttctg
cgggggtgctttgtgaagaggggtgaggcgtag
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