Polypterus senegalus (gray bichir): 120518138
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Entry
120518138 CDS
T08668
Symbol
usp43a
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43a
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psex01002
]
120518138 (usp43a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120518138 (usp43a)
Enzymes [BR:
psex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120518138 (usp43a)
Peptidases and inhibitors [BR:
psex01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120518138 (usp43a)
Ubiquitin system [BR:
psex04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120518138 (usp43a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
120518138
NCBI-ProteinID:
XP_039596685
LinkDB
All DBs
Position
17:complement(87326531..87458502)
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AA seq
1114 aa
AA seq
DB search
MEKAPRSRTPPQKAGKLLRKKPLRSVGSFVSRILRTLSTLSRLGEHENPEPEDDDGGFRG
APSGDVAPGPTTHGHTRERFTLSPTDKTPGVLGLKNHGNTCFMNAVVQCLSNTDLFAEYL
GLERYKLDLRPLRTEHGEVTEQLASLVRALWTLEYTPQLSVDFKNIVSKYGSQFKGNSQH
DALEFLLWLLDKVHEDITSAPSSISKMRPPGKALVTVDESPGDGQLPVDGSHSFVQNHFQ
AQYRSSLTCPHCHKQSNTFDPFLCISLPIPLRQTRPVYVTLVFLNKGQRYLRIGLAVPLF
GSVACLREMVANEGKVTHDQVILTELYSTGFQRSFSDDEDLTSIAENDSVYAFQAPTLLN
RNASHVSGYHHSLPSSPYSSGQNCHKLPHSGTLSSEFLHQGMSGKVLLLICSTTGTGQQS
VRFGPPFLMREDRAISWEQLQQCILSKMCYLMIGDAQTQNFGALFRIRVVGGSSTFNHLS
PQDAHPLYHPAVERALKFCGPGGPPHVKLIIEWNDKAKECLFGNIQEEVVHDDESVRVQQ
QQHQQQHSCSLDECFQLYTKEEQLAPDDAWRCPHCKKLQQGTVKLSLWTLPDILILHLKR
FRQVGERRNKLSTLVRFPFNGLDMAPHVVKRSHSTRNLLSPWPQWKQTAPDGNQHQQDFL
YDLYAVCNHHGGLHGGHYTAFCRNSVDAQWYSYDDSSVELIPQEEVCTRGAYILFYQKRN
IIPQWSASSSLRGSTSSSMSDHWLVRLNQDSKRASLVSRVSTNCASSPESLESPVFLEVS
HKEEKGGFETRPFVRGIQGRSVSMKMPTKMKAGMTKSLPLRWSFGAKDQPKPVPGELVEY
LESGRRPRCTTDSIVPLMTLNNDESRTYAEELQPRSHSPLKEPTISCLGKTSRETLLEDQ
QKMQLENEKRGSLKKNRKIKDSDTLTRRTSKKNKEGDLNTLSTGNGRKSSNSENTLKKNK
LGKGEREDPNPPEVTKGKKSEGSKPQEGKFTFFKNSFLRKNSKKPKEAVVSRSTEVINGP
CMATLPNGGHSKMLKNSGSSGHPVTDIKRSQSSSNIQSKTDWTLRRTASLHRNGLLHPTP
KAGCTEKVTNDTPQKMRHSTASLNSKKSVPESSF
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggcgccgaggagcaggacgccgccgcaaaaagctgggaagctgctccggaag
aaaccgctgcgctcagtcggcagcttcgtcagccgcatcctgcgaactttgagcactttg
tcgcgtctcggcgagcacgagaaccccgagcctgaggacgacgacggcggctttcggggc
gcaccttccggagatgtcgcccccggcccgactactcatgggcacacccgagagcgcttt
actctcagcccgacggacaaaaccccaggagtgcttgggctcaagaatcacggcaacacc
tgcttcatgaacgccgtggtgcagtgcctgagcaacacggacctcttcgccgagtacttg
gggctggagcgctacaagttggacctgcggcccctgcggacggagcatggggaggtcacg
gagcagctagcctccctggtccgggcactgtggactctggagtacacccctcagctgtct
gtcgacttcaagaacattgtgtctaagtatggctcccagtttaaaggaaactctcagcat
gatgccttagaattcctgctgtggctgctagacaaagttcatgaagatatcacatctgca
cctagcagcatcagtaagatgagaccgcctggaaaggccctagtgacggtagatgagtct
ccaggagatgggcaactgccagtggatggaagtcacagctttgtccagaaccattttcag
gctcagtacagatcctctttgacctgcccacactgccacaagcagagcaatacctttgac
ccattcctgtgtatctcgctgcccatccctttacgacagaccaggcctgtttatgttacc
ttggtcttcctcaacaaagggcaacgatacttaaggattggattagctgtacctcttttt
gggtctgtggcatgcttaagggagatggtggcaaatgaagggaaggtcacacatgatcag
gtaattcttacagagctctattccactggttttcagcgctcgttttctgatgatgaggat
ctgaccagcatagctgaaaatgacagtgtctatgcttttcaggctcctacattgctgaac
agaaatgcatctcatgtttcaggatatcaccatagcttaccatcatccccctactcctca
ggccaaaattgtcacaagttgccacactcgggcaccttatcatcagagtttctacatcag
ggaatgtcgggaaaggtgcttttgcttatttgtagtactacgggaactggacagcaaagt
gttcgatttgggcctccattcttgatgagagaagaccgagccatctcatgggaacagctg
cagcagtgcattctcagtaaaatgtgttacctaatgattggggatgcccaaactcagaat
tttggtgccttgtttagaattcgagtcgtgggaggatcatccaccttcaatcacctgtct
ccccaggatgctcatccactgtaccacccagcggtagagagggccctcaaattctgtgga
cccggtggacctcctcatgtgaagttgatcattgagtggaatgacaaagccaaggagtgt
ttgtttgggaatatccaagaggaggtagtccatgatgatgagagtgtccgggttcaacaa
cagcaacaccaacagcagcacagctgctcgctggacgaatgctttcaactgtataccaag
gaagagcagcttgctccagatgatgcctggaggtgccctcactgtaagaaactccagcag
ggtacagtcaagctcagcctttggacactgccagacattctcattctacacctgaagcgc
ttcaggcaggttggagaacgacgcaacaagctgtccactttggtgcgttttcccttcaac
ggcctggatatggctccccatgtggtcaagagaagtcacagcacccgtaacctgctgagc
ccatggccacagtggaaacagactgctccagatggtaatcagcatcagcaagactttctt
tatgacctttacgctgtgtgcaatcaccatgggggcttacatggtggccattacacagcc
ttctgcagaaattcagtggatgcccagtggtacagttatgatgatagcagtgttgaactc
attccacaggaagaggtgtgtaccagaggggcctacattcttttctaccaaaaacggaat
attattcctcaatggtcagcaagcagctcactgagaggttcaaccagctcctctatgtca
gatcactggcttgtacgcttgaatcaagatagtaagagggcgagtctggtatctagagtt
tcaaccaactgtgcttcctctcctgaatctcttgaatctccagtctttcttgaagtatct
cacaaagaggaaaaaggtggttttgaaaccaggccctttgttcgtggcatccaaggaaga
agtgttagcatgaaaatgccaacgaagatgaaagcaggcatgacaaaatctctaccactc
cgttggtcctttggagccaaggatcagcccaagccagtgcccggagaacttgttgagtat
ttggagtcaggcaggcgaccaagatgcacaactgactccatagttcctttgatgactttg
aacaatgatgaaagtagaacctatgcagaagagctgcagcctcgttcccatagccctctc
aaagaacccactataagttgtttggggaagacctcaagagaaactctgctggaagaccag
cagaaaatgcagctggaaaatgagaaaaggggcagcctaaaaaaaaatagaaaaataaaa
gacagtgacactttgaccaggagaacttctaagaaaaacaaagagggtgatttaaatact
ttatcaactggtaatggtagaaaaagttccaacagcgaaaacacgctaaagaaaaacaaa
ctgggaaaaggtgaacgggaggatccaaatcctcctgaagtaaccaaaggcaagaagagt
gaaggcagcaaaccccaagaggggaagttcaccttctttaaaaacagcttcctaagaaag
aacagcaaaaagcccaaagaggctgttgtgtccaggagcacagaagtgatcaatggcccc
tgtatggctacactgcctaatgggggacacagtaagatgctaaagaacagtggcagttct
ggtcacccagtaactgacatcaagagatctcagagttcctccaacattcaaagcaaaacc
gactggactctgaggaggacagcttctttacatagaaatgggctgctacaccctacccca
aaggctggttgtacagaaaaagtcaccaatgacactccgcagaaaatgcggcacagcact
gcatcacttaacagtaaaaaatcagtgccagagtcaagcttctga
DBGET
integrated database retrieval system
