KEGG   Polypterus senegalus (gray bichir): 120518161
Entry
120518161         CDS       T08668                                 
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex04137  Mitophagy - animal
psex04144  Endocytosis
psex04145  Phagosome
psex04148  Efferocytosis
psex05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:psex00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    120518161 (rab5c)
   04145 Phagosome
    120518161 (rab5c)
   04137 Mitophagy - animal
    120518161 (rab5c)
   04148 Efferocytosis
    120518161 (rab5c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120518161 (rab5c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:psex04131]
    120518161 (rab5c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psex04147]
    120518161 (rab5c)
   04031 GTP-binding proteins [BR:psex04031]
    120518161 (rab5c)
Membrane trafficking [BR:psex04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    120518161 (rab5c)
 Endosome - Lysosome transport
    120518161 (rab5c)
Exosome [BR:psex04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120518161 (rab5c)
  Exosomal proteins of other body fluids (saliva and urine)
   120518161 (rab5c)
  Exosomal proteins of colorectal cancer cells
   120518161 (rab5c)
  Exosomal proteins of bladder cancer cells
   120518161 (rab5c)
GTP-binding proteins [BR:psex04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    120518161 (rab5c)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase AAA_16 SDR-like B12-binding
Other DBs
NCBI-GeneID: 120518161
NCBI-ProteinID: XP_039596724
LinkDB
Position
17:11374049..11451737
AA seq 216 aa
MAGRGGAARPNGPSAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDETTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPANAAGPAGRPRGVDLQENSQENRSQCCGN
NT seq 651 nt   +upstreamnt  +downstreamnt
atggcgggtaggggaggtgccgcacgacctaacgggccttccgcaggcaacaaaatttgc
cagttcaagctggtgctgttgggggagtcagctgtgggcaagtccagcctcgtcctgcgt
tttgtcaaaggccagttccacgagtaccaggagagcacgattggagctgctttcctcaca
cagacggtctgtttggatgagactacggtaaagttcgagatctgggacacagcaggacag
gagcggtatcacagcctcgcaccgatgtactacagaggggcacaggctgccattgttgtt
tttgacatcactaacacagatacattcacacgagctaaaaactgggtaaaggaacttcag
aggcaagccagtcccaacattgtcatcgccctggcaggaaacaaggctgacctcgctagc
aagagagccgtcgaattccaggaagcacaagcctatgcagatgataacagtttgctcttc
atggagacgtctgccaagactgcgatgaacgtgaatgaaatttttatggccattgcaaag
aagctaccaaaaaatgagcctgcgaacgctgccggccctgccggcagacccagaggagtg
gacctacaggagaacagtcaggagaatcggagtcagtgctgcggaaactga

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