Polypterus senegalus (gray bichir): 120518161
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Entry
120518161 CDS
T08668
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04137
Mitophagy - animal
psex04144
Endocytosis
psex04145
Phagosome
psex04148
Efferocytosis
psex05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120518161 (rab5c)
04145 Phagosome
120518161 (rab5c)
04137 Mitophagy - animal
120518161 (rab5c)
04148 Efferocytosis
120518161 (rab5c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120518161 (rab5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120518161 (rab5c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psex04147
]
120518161 (rab5c)
04031 GTP-binding proteins [BR:
psex04031
]
120518161 (rab5c)
Membrane trafficking [BR:
psex04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
120518161 (rab5c)
Endosome - Lysosome transport
120518161 (rab5c)
Exosome [BR:
psex04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120518161 (rab5c)
Exosomal proteins of other body fluids (saliva and urine)
120518161 (rab5c)
Exosomal proteins of colorectal cancer cells
120518161 (rab5c)
Exosomal proteins of bladder cancer cells
120518161 (rab5c)
GTP-binding proteins [BR:
psex04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
120518161 (rab5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
AAA_16
SDR-like
B12-binding
Motif
Other DBs
NCBI-GeneID:
120518161
NCBI-ProteinID:
XP_039596724
LinkDB
All DBs
Position
17:11374049..11451737
Genome browser
AA seq
216 aa
AA seq
DB search
MAGRGGAARPNGPSAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDETTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPANAAGPAGRPRGVDLQENSQENRSQCCGN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtaggggaggtgccgcacgacctaacgggccttccgcaggcaacaaaatttgc
cagttcaagctggtgctgttgggggagtcagctgtgggcaagtccagcctcgtcctgcgt
tttgtcaaaggccagttccacgagtaccaggagagcacgattggagctgctttcctcaca
cagacggtctgtttggatgagactacggtaaagttcgagatctgggacacagcaggacag
gagcggtatcacagcctcgcaccgatgtactacagaggggcacaggctgccattgttgtt
tttgacatcactaacacagatacattcacacgagctaaaaactgggtaaaggaacttcag
aggcaagccagtcccaacattgtcatcgccctggcaggaaacaaggctgacctcgctagc
aagagagccgtcgaattccaggaagcacaagcctatgcagatgataacagtttgctcttc
atggagacgtctgccaagactgcgatgaacgtgaatgaaatttttatggccattgcaaag
aagctaccaaaaaatgagcctgcgaacgctgccggccctgccggcagacccagaggagtg
gacctacaggagaacagtcaggagaatcggagtcagtgctgcggaaactga
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integrated database retrieval system