Polypterus senegalus (gray bichir): 120518215
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Entry
120518215 CDS
T08668
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03082
ATP-dependent chromatin remodeling
psex03083
Polycomb repressive complex
psex04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120518215 (rbbp4)
03083 Polycomb repressive complex
120518215 (rbbp4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
120518215 (rbbp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120518215 (rbbp4)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
120518215 (rbbp4)
Histone modification proteins
HAT complexes
HATB complex
120518215 (rbbp4)
HDAC complexes
Sin3A-HDAC complex
120518215 (rbbp4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
120518215 (rbbp4)
PRC2.2
120518215 (rbbp4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
120518215 (rbbp4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
120518215 (rbbp4)
Chromatin remodeling factors
NuRD complex
120518215 (rbbp4)
NuRF complex
120518215 (rbbp4)
NuRF complex (fruit fly)
120518215 (rbbp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
Beta-prop_IFT140_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
120518215
NCBI-ProteinID:
XP_039596818
LinkDB
All DBs
Position
17:complement(75373302..75404141)
Genome browser
AA seq
423 aa
AA seq
DB search
MADKEGFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDF
SVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI
NHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGY
GLSWNPNLSGCLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHES
LFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAED
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGGTDPE
VQG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaagaaggttttgatgatgctgtagaggagcgagtgatcaatgaagagtac
aaaatttggaagaagaataccccatttttatatgatttagtgatgactcatgctcttgag
tggcccagtctcactgctcagtggttgccagatgtcacaagacctgaagggaaggatttt
agtgtccatagattagttcttggaacacacacttcagatgagcagaaccatttggtcatt
gccagtgtacagttgccaaatgatgatgcccagtttgatgcatctcattacgacagtgag
aaaggagagtttggtgggtttggctcagtcagtggaaaaattgaaatagaaatcaagata
aatcatgaaggagaggttaacagagctcgatatatgccacagaatccttgcattattgcc
acaaagacgccaaccagtgatgtgcttgtgtttgactacactaagcatccatcaaagcca
gatccatcgggagagtgtaatcctgatctgcggctcagaggtcatcagaaggaaggttat
ggactctcatggaaccctaacctaagtggttgtttactgagtgcatcagatgatcatact
atttgtctatgggacatcagtgcagtgccaaaagaaggcaaagtggtggatgcaaagact
atcttcaccggacacacagctgttgtggaggatgtctcctggcacttgttacatgagtcc
ctgtttggatcggtggcagatgaccaaaaactcatgatctgggacaccagatccaataac
acttccaaacccagccatgcggtggatgctcacacagccgaagtgaactgtttgtccttt
aacccatacagtgagttcattctagccaccggctctgcagataagactgttgcactttgg
gatttgcgaaacttaaagttgaagttgcattccttcgagtctcataaagatgaaatcttc
caggttcagtggtcacctcacaatgaaaccatcttagcatccagtggaacagaccggcga
ctcaatgtgtgggacttgagtaaaattggggaggaacagtcacctgaagatgctgaagat
ggacctccggagctcctgtttatccatggtgggcatactgctaagatatcagacttctcc
tggaaccccaatgaaccctgggtaatttgctctgtatcagaggacaacataatgcaagta
tggcaaatggctgaaaatatatacaatgatgaggaccctgaaggtggtacagatcctgaa
gtacagggatga
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