Polypterus senegalus (gray bichir): 120518299
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Entry
120518299 CDS
T08668
Symbol
rtn1a
Name
(RefSeq) reticulon-1a isoform X1
KO
K20721
reticulon-1
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120518299 (rtn1a)
03036 Chromosome and associated proteins [BR:
psex03036
]
120518299 (rtn1a)
Membrane trafficking [BR:
psex04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
120518299 (rtn1a)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120518299 (rtn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
DUF4736
Motif
Other DBs
NCBI-GeneID:
120518299
NCBI-ProteinID:
XP_039596953
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Position
18:complement(30562786..30700049)
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AA seq
775 aa
AA seq
DB search
MSTHPNVESGSDSNWFGEDFEQIDRFGNSLTTVEEKAAVAVSADVTQRSWREEQPAEPAN
SRPPPPVTMETVSTGHAQYSGVGDPLKFEKTAEDNGTFYTSLLSGLNPGIHQDPLSSSGD
QNWDVPSDFKNSDMKTSEKSRDRIPSFESQSMFSSDSGIEMTPGESIDSKNILECEKMEG
YHYIDISCSRNTGQNDKGVSKGNLEEKINPMNPTPQMLSDLGDYSEKRQAETPETLGAAL
EKHHCPYVEDLSDEDTSDYQIMGNPNKVSPVKITLTQIDAPLDNRVTVSEKESILSLGLE
GVPTVTLSEPEDDSLGSSTPPLTEESESPAEFTFHSGDKKSFSPTKSPDQAFGSRPRSPS
PSSERDGIDQVFPRIPSSSLLSAQDPEVSSTESEDSDIKLLPEEPLISEEIGSSGYMTFG
QIAGSSPSPVSPLIQYSILREEREAELDSDLIIESCDASSASEESPKREQDSPLKRSQPI
GNKVIDLQTKHVVAEVNSGTPNDKQSIEKMKNLTNADDIFSKSKHSAGYATPEVRIEQPS
SGDKFTKKATQTKAEIIEIKKELHGQDQGAEKKILCGTFLHLFERQKAIDLLYWRDLKQT
GILFGSVLLLLFSLTQFSVVSVIAYLALAALSATISFRIYKSVLQAVQKTDEGHPFKAYL
DVEISLSQEQIQKYADNAQLYLNSTMKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNG
LTLLIMAVISMFTMPVVYEKYQVQIDQYLGLVRTHVNSVVAKIQAKIPGAKRKAE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtctacacatccaaatgtggagtctggctcggacagcaactggtttggcgaggatttc
gaacagattgaccgctttggcaacagcttgaccactgtggaagagaaggcggccgtggcg
gtgagtgctgatgtgacccagagaagctggcgagaggaacaacccgcagagcctgcgaac
agccgaccgcctcccccggtcaccatggaaactgtctccacaggtcatgcacagtactct
ggtgttggtgatcccctgaaatttgaaaaaactgcagaggataatgggactttttataca
tcactcctgtcaggtcttaatccaggcatccatcaagatcctttatcttcttctggagac
caaaactgggatgtcccatcagattttaaaaactcggatatgaaaacatcagaaaaatca
agggaccgaatcccaagttttgaatctcagagtatgtttagttctgattcaggaattgaa
atgacccctggagaatcgattgattccaaaaatattttggaatgtgaaaaaatggaaggc
tatcactatattgatataagttgttccagaaacacaggtcaaaacgataaaggagtatcc
aaaggaaatttggaagagaagattaatccgatgaatcccactccccagatgctgtctgat
ttaggagattactctgagaagagacaagcagagacacccgagacattaggggcagcttta
gaaaagcaccactgcccttacgtagaagatttgtctgatgaagatacatcagattaccag
ataatgggtaatccaaataaagtcagtcctgtaaagattaccctcactcagatagatgcg
cctttggataacagagtcacagtatctgaaaaggaaagcattctgagccttggactggaa
ggggtacccacagtcacactgtctgagccagaagatgatagtttgggatcatcaacacct
ccactcacagaagagtccgagtccccagcagaatttacattccactctggagacaagaaa
tctttcagtccaaccaagagtcctgatcaggcctttggttcaagaccgagatctcccagc
ccttcatctgaaagagatggcattgaccaagtctttcccaggatcccaagttcatctttg
ctgtccgcacaagatccagaagtgagtagcacagagtcagaagactcggatattaagctt
ttaccagaggagccacttatatctgaagagattgggagctccggctatatgacatttggt
cagattgctggatcgtctccttctccagtatctccattaatccagtacagcatactccga
gaagaacgggaggctgaactggatagcgatcttatcattgagtcttgtgatgcttcctct
gcctctgaagaaagtccaaagagagaacaagattcccctttgaagaggtcccagcctatt
ggaaacaaagtcattgatttacaaacaaagcacgttgttgcagaagttaactcgggcaca
cctaatgacaaacagtccattgaaaaaatgaagaatctgacaaatgctgatgacattttt
agcaaatcaaagcactctgccggctatgccacccctgaggtgaggattgagcagccatct
tctggggacaaatttactaaaaaagccacccaaaccaaagcagaaattatagaaatcaaa
aaagagttgcatggtcaagaccagggagctgaaaaaaagattttatgcggaaccttcctg
catctgtttgagagacaaaaagccattgacttgctgtactggcgtgacctcaagcagaca
gggatcctgtttggcagtgtgttgcttcttctcttctccttgacacaattcagtgtggtt
agcgtcatcgcctaccttgctcttgctgccctttcagccaccatcagttttagaatctac
aagtctgtgctgcaggctgtacagaagactgacgaaggacatccattcaaggcctatctg
gatgtggaaatttctctgtctcaggaacagattcagaaatatgccgacaatgcacagctt
tacctgaacagcacaatgaaggagctgagaagattattcctcgtgcaggaccttgtggat
tctctgaagtttgcagtgcttatgtggctactgacatatgttggcgccctcttcaatggc
ctgacactgctgataatggctgtcatctctatgttcacaatgcctgttgtttatgaaaaa
taccaggtgcagattgaccagtacctgggtcttgtgagaactcacgtcaattccgtggtg
gcaaaaatccaagctaaaatcccaggtgccaagaggaaggctgaatag
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