Polypterus senegalus (gray bichir): 120518374
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Entry
120518374 CDS
T08668
Name
(RefSeq) RNA-binding protein 25-like isoform X1
KO
K12822
RNA-binding protein 25
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120518374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psex03041
]
120518374
Spliceosome [BR:
psex03041
]
Complex A
U1 snRNP components
U1 related factors
120518374
Complex B
120518374
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
120518374
NCBI-ProteinID:
XP_039597084
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All DBs
Position
18:complement(51846415..51950570)
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AA seq
813 aa
AA seq
DB search
MSFPPHLNRPQIGIPPLPPGMPPPQFAGFPTTVPPGAQMIPMMGIMTPAPTVLVPTSMPM
VGKPMGPRKDFPGMRIKENEDTGGPTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQ
GASGKLQAFGFCEYKEPESTLRALRLLHELQIGDKKLLVKVDAKTKAQLDEWKAKRRTAN
GNSQSDSNADEEEELDEESKQRDQIVKGAIEGLIREYSNELNAPSQEADTHHRKKKKEKK
EDVGFVKLEDINAIEMEEDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIERERRERE
KERERERERRDREREKEREREREKEREKERERERERDRERTKDKERERERERDKERSRDR
SKDRSRSREKSRDREKDKKRDREEDEEELYERRKLERKLREKEAAYQERLKNWEIRERKK
AREYAKEAEREEERRRETTKEGKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEA
DERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPPIKQEPESEEEAEEEK
TQVQQKEERKDVVDQEPDSEDDVDEQEEEEEEEEEPQEQKPCLKPTLRPISSAPSVSSAS
GNASPNTPGDESPCGIIIPHENSPGTHLQEEHRPKIGLTLKLGSSNSPSQPSGGKRKKLA
VDSVFNKFDDEESDEVPRKRKLVPLDYEDEDKGGAKGNVNTEEKRKHIKSLIEKIPTAKP
ELFSYPLDWSIVDSTLMERRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHSTPQGILDD
VAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttccacctcatctaaatcgtccacaaattgggattcctcctttaccaccaggg
atgccacctccgcagtttgcaggctttcctacaacagttccacctggtgcacaaatgatt
ccaatgatggggattatgacaccagctcccactgttttggttcctacatccatgccaatg
gttggcaagccaatgggcccacgaaaagattttcctggaatgagaatcaaagagaatgaa
gacactggtggtccaaccacaactgtgtttgttggaaatatttcagaaaaagcttctgac
atgcttataaggcagcttttggcaaaatgtggattggttctgagctggaaaagagtgcaa
ggtgcatctggaaagctccaagcttttggtttctgtgaatacaaggagccggaatcgaca
ttaagggcattgcgattacttcatgagctgcagatcggtgataaaaagcttttggtaaaa
gtggatgccaaaaccaaagctcagctagatgaatggaaggccaaaaggagaactgctaat
gggaattctcagtctgactcaaatgcagatgaagaggaggagttggatgaagagagtaaa
cagcgtgaccagattgtgaagggtgcaattgaaggacttattcgtgaatactcaaatgag
cttaatgctccctcccaggaggctgacacccatcacagaaagaagaaaaaggaaaaaaaa
gaagatgtaggttttgtaaaattggaagacataaatgcaattgaaatggaagaagacaag
agagacttaatttctcgggagatcagtaaattcagagatactcacaagaaactggaggaa
gaaaaaggcaaaaaagaaaaagagcgtcaagaaattgagcgggaaaggcgggagagggag
aaagaacgagagagagagagagaacgacgtgaccgtgaaagggaaaaggaacgggaacgg
gaaagagagaaggagagagagaaagagcgggagagagaaagggagagggatcgagagaga
accaaggacaaggagagggagcgagaaagggagcgcgataaagaacgaagcagagaccga
agtaaagaccgtagtcgatcacgggagaagagcagagatagagaaaaggacaaaaaacgt
gatcgagaagaagatgaggaagaactgtatgagagaagaaaattggagagaaagctgaga
gaaaaagaagctgcctaccaagagcggctaaaaaactgggaaattagagagaggaaaaaa
gctcgagaatatgcaaaagaagctgaaagggaggaggaacggagacgagaaacaacaaaa
gaaggtaaaagacttaaggagtttcttgaagattatgatgatgacagagatgatcctaaa
tactacagaggcagtgctcttcagaaacgcttacgtgacagagaaaaggagatggaagca
gatgaacgagacagaaaacgtgaaaaggaagaattggaagaaatacgacaacgactttta
gcagagggtcatccagatccagatgctgaattgcaaaggatggagcaagaagcagagcgg
cgtcggcagccacccataaaacaggagccagagtctgaggaagaagcagaagaagaaaaa
acacaagttcagcaaaaggaagaaagaaaagatgtggttgaccaggagccagattcggag
gatgatgttgatgagcaagaggaagaggaggaggaggaagaggaacctcaagaacagaag
ccatgccttaaacctacgctaagaccaattagctctgctccatcagtgtcatcagctagt
ggaaatgcctcgcccaatactcctggtgacgagtctccctgtggtatcattataccccat
gagaactcccctggcacacaccttcaggaggaacatcggcccaaaattgggctcactctc
aaattaggttcttcaaatagcccaagtcaaccaagtggagggaaaagaaagaaattagct
gtggatagtgtgttcaacaaatttgacgatgaagaaagtgatgaggtgcctcgtaaaagg
aaactggtacctttggactatgaagatgaagacaaaggaggtgctaaaggcaatgtgaac
acagaagaaaagcggaaacatataaaaagcctcattgagaagataccaactgccaagcca
gagctgttctcttatcctcttgactggtccattgtagacagtacattaatggaacggcgc
atcagaccatggataaataaaaagattattgagtacataggagaagaagaagcaacatta
gtggattttgtttgttcaaaggtcatggctcacagtacaccgcaaggcattttagatgat
gtagcgatggtgcttgatgaagaagcagaagttttcattgtaaaaatgtggaggttatta
atttatgaaacagaggcaaagaagattggattagtgaaataa
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