Polypterus senegalus (gray bichir): 120518426
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Entry
120518426 CDS
T08668
Symbol
capn3a
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120518426 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psex01002
]
120518426 (capn3a)
Enzymes [BR:
psex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
120518426 (capn3a)
Peptidases and inhibitors [BR:
psex01002
]
Cysteine peptidases
Family C2: calpain family
120518426 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
CAPN13-like_C_EFh
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
120518426
NCBI-ProteinID:
XP_039597141
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All DBs
Position
18:complement(69744531..69846690)
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AA seq
794 aa
AA seq
DB search
MMPATVTPNTESSLLPPGSAILEGNPSGTYTAILNRNHYVIDSQKYKTFHELRDKYFQKN
VLFEDPVFPADDSSLFYSQQYPITFEWKRPHEICENPQFIVGGANRTDICQGDLGDCWFL
AAIACLTLNEKLLYRVIPPDQNFTENYAGIFHFQFWRYGDWVDVVIDDRIPTFNNQLVFT
KSAERNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFFEMKEAPKDLFNIL
KKALDRASLMGCSIDDTILGVTPGVPPPDMIGKVIDQMLSDANLGKKTGDQPIGSLVPAR
FETRTATGLVKGHAYSITGVEETQFKDTKVRLVRLRNPWGQVEWNGPWSDNSKEWTIIKK
SEKDRLQHQIAEDGEFWMSFEDFKKNFTKIEICNLTPDALEDDKVHKWTVSVNEGRWVRG
CSAGGCRNYPDTFWTNPQYRLKLLEEDDDPEDNEVACTFVVALMQKNRRKERKMGANLFT
IGFAIYEVPKEMHGNKQHMPKDFFLYNASKARCKSYINLREVAQRFRLTPGEYVIIPSTY
EPHQEGEFILRVFSEKRNTSEEIENRIEADNPVPKKKKAKPIVFVSDRANVNREIETDGY
MEEEELLKKQKPAPSSAAEESEEDKQFRTIFQQIAGDDMEITANELKNVLNRVVAKHKDL
KTDGFTRESCRSMIALMDTDGSGRLNLQEFRHLWNKIKQWQGIFKQYDSDHTGTINSYEM
RNAVNDAGFRLNNQLYDIITMRYADDKMNIDFDSFICCLVRLEGMFRAFQAFDKDGDGLI
KLSVLEWLQLTMYA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctgccacagttacgcctaacacagagagttcccttttgcctccaggaagtgct
attctggaagggaacccttcagggacttatactgccatcctaaacagaaatcactatgtc
atcgactcccagaaatacaaaacctttcatgaattgagggataaatattttcaaaagaac
gtcctgtttgaagaccctgtatttcctgcagatgactcttccctgttttatagccaacag
tacccaattacatttgagtggaaaagaccacatgagatttgtgaaaatccacagttcata
gttgggggagccaataggacagacatctgccaaggagatctgggtgattgctggtttctg
gctgctattgcctgtttgactttgaatgaaaagcttctttatcgagtgataccacctgac
cagaattttacagagaactatgctggcattttccattttcagttttggcgatatggtgac
tgggtggatgtggtcattgatgaccgaatcccaacttttaacaaccagctggtgttcacc
aaatctgctgaacgaaatgagttctggagtgcacttctggagaaggcttatgcaaagcta
catggctcatatgaagctctgaaaggaggaaacaccactgaggcaatggaagattttaca
ggtggggtcacagaattctttgagatgaaagaggcccccaaagacctctttaatattctg
aaaaaggctctggacagggcatccctcatgggctgttctatagatgatacaatattgggt
gtcacccctggtgtccctccacctgacatgattggcaaagtgattgatcaaatgctcagc
gatgccaacctgggaaaaaaaacaggcgatcagcccatagggtcattggttccagctcga
tttgagacacgaactgctaccggattggtcaagggtcatgcctattctatcactggggtg
gaggagacacaattcaaggacaccaaagtgcgactggtcagactgaggaatccctgggga
caggtggagtggaatggaccctggagtgacaattccaaagagtggactataatcaaaaag
agtgagaaggacaggctacagcaccagattgcggaggatggagagttctggatgtcattt
gaagatttcaaaaagaacttcaccaagatagagatctgtaatttaaccccagatgcccta
gaagacgacaaagttcacaagtggacggtttcagtgaatgaaggtcgctgggtccgtgga
tgctctgctggaggctgtcgaaattatcctgatacattctggaccaatcctcaatatcgc
ttgaagcttctagaagaagatgatgacccagaggacaatgaggttgcttgcacttttgtg
gtagctcttatgcagaagaaccgcaggaaagagaggaaaatgggggctaatctcttcacg
attggttttgccatctatgaggtgcccaaagagatgcatggaaacaaacagcatatgccc
aaggacttcttcttgtataatgcctccaaggctcggtgcaagtcttacattaacttgagg
gaagtggcgcagcgtttccgtttgacaccaggggaatatgtgattataccctctacctat
gaacctcaccaggaaggtgaattcatcctcagagtcttctcagagaagagaaacacgtca
gaggagattgaaaacaggattgaggctgataatccagtgccaaagaagaaaaaagccaag
cccatcgtctttgtctcagacagagcaaatgtcaatagagagattgaaactgatggctac
atggaggaagaggagctgttaaagaaacagaagccagctccatcttcagccgcagaggag
agtgaggaggacaagcagtttaggactatcttccagcagattgcaggagatgatatggag
atcaccgccaatgaactgaagaatgtgttgaacagagtggtggccaaacataaagacctg
aagacggatgggttcacccgggagtcttgccgcagtatgatagcactgatggatacagat
ggatcagggcgtttgaacctgcaggaattccgccatctttggaataaaatcaagcagtgg
cagggaattttcaaacagtatgacagtgaccataccggaactattaacagctatgagatg
aggaatgctgtgaatgatgccgggttccgtctgaataaccagctatacgatattatcaca
atgcggtatgcagatgacaaaatgaatatcgattttgacagtttcatctgctgtctggtg
cggctggaagggatgttcagggcatttcaagcttttgacaaagatggtgatggcctgatt
aagctcagtgtactggagtggctccagctcaccatgtatgcctaa
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