Polypterus senegalus (gray bichir): 120518435
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Entry
120518435 CDS
T08668
Symbol
vti1b
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120518435 (vti1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120518435 (vti1b)
Membrane trafficking [BR:
psex04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
120518435 (vti1b)
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
BORCS6
Fusion_gly
DUF3958
Motif
Other DBs
NCBI-GeneID:
120518435
NCBI-ProteinID:
XP_039597154
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Position
18:complement(53259448..53273081)
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AA seq
225 aa
AA seq
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MSSEEFERMHEMYTCLYEELKSLPERTSRCHGEERKRLIREFDEKADEAVEMVDGMEQEL
RTAPSSFRNPMMSKMRMYRRDLGKLQRDIRSVEVSTGVRGEIKHGVYTVENEQRTELQSQ
RALLLQGTDSLNRATESIERSHRIAAETDQVGTDIIEELGEQKEQLYRTKDRLVNTGENL
SRSRKILRSMSRRIMTNKLLLSFIIIMELGILGAVVYLKFFRNHK
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggaagagtttgagagaatgcacgaaatgtacacatgcttgtacgaggagctc
aaatcactgccggagcgcacgtcgcgctgtcacggagaggaaaggaagaggctgattcga
gagtttgatgagaaagcagacgaagcggtggagatggttgacggcatggagcaggagtta
cggacggccccttcttccttccgcaaccccatgatgtctaaaatgcgcatgtaccggaga
gacttgggcaaactgcagcgggatatcaggagcgtggaggtcagcaccggagtacgaggc
gagatcaagcatggcgtttacactgtggagaacgagcagagaacagagttacagtcgcaa
agagccttactcctccaaggcacagactccttaaacagggccacagagagtattgaacgc
tcgcacagaatagcagccgaaactgaccaggttggaacggacatcatcgaggagctggga
gaacagaaagagcagctgtaccgtacgaaggaccggctggtcaatactggcgaaaatctt
agcagaagtcgtaagattctccgatcgatgtccagaaggattatgacaaacaagttgttg
ttgtctttcatcatcatcatggagctgggcatccttggagcagttgtttacctcaagttc
ttccggaatcacaagtag
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