Polypterus senegalus (gray bichir): 120518436
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Entry
120518436 CDS
T08668
Symbol
srsf5a
Name
(RefSeq) serine and arginine rich splicing factor 5a
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03040
Spliceosome
psex05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120518436 (srsf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psex03041
]
120518436 (srsf5a)
Spliceosome [BR:
psex03041
]
Common components
Common spliceosomal components
SR proteins
120518436 (srsf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
120518436
NCBI-ProteinID:
XP_039597155
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All DBs
Position
18:complement(55861661..55871401)
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AA seq
279 aa
AA seq
DB search
MSGCRIFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK
VLCSERVTVEHAKSRRGRGGGGAGGGSRFPPRFNNYRQSRSGNSRYGPPVRTEHRIIVEN
LSSRISWQDLKDMMRKVGEVTFVDAHRSNMNEGVVEFASRSDMKNAIDKLNGTELNGRKL
KLSEDRKRQSRSRSRSRSYSRSRSRSRSRSKSRSRSRSQSRNRSRSRSRSVSRTPEKKTQ
RSDPHSPSRSNSQSRSRSRSPAEEKAQSRSRSPSVESQH
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgagtggttgtcgtatatttattggtcggctaagtccccacgctagagagcgcgatgtg
gagaagttttttaagggctatggtcgtatcagagaaatcaacttgaagaatggctttggt
tttgtggaatttgatgaccatagggatgctgatgatgctgtgtacgaactgaatggaaaa
gttttgtgtagcgaaagagtcacagtagagcatgccaagtctcggagaggcagaggcggt
ggaggtgctggtggtggaagcaggtttcctcctcgttttaataactatcgccaatccaga
agtggcaattcacgctatggccctcctgtgcgtacggagcacagaatcattgttgaaaac
ttgtcttctcgaataagctggcaggatctgaaagacatgatgaggaaagttggtgaagtt
acatttgtggatgctcacagaagtaatatgaatgaaggggttgttgagtttgcatctcgc
agtgatatgaagaatgcaattgacaaactaaatggaactgaactaaatgggcgtaaactt
aaactctctgaagatcgcaaaaggcagagcagaagtcgttcccgttccaggagctactcc
agatccagaagccgatccagaagtcgttcaaaatctcggagcaggagtcgaagccagagc
agaaatcgtagtcgaagcagatcccgctcagtcagtcgaacccctgagaaaaaaacacag
cgatctgatccccattctccttctcgatctaactctcagtcacgttctcggtcaagatcc
ccagccgaagagaaagctcagtcgagatcaagatcgccttctgtcgaaagccagcactaa
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