Polypterus senegalus (gray bichir): 120518469
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Entry
120518469 CDS
T08668
Symbol
scfd1
Name
(RefSeq) sec1 family domain-containing protein 1 isoform X1
KO
K19998
sec1 family domain-containing protein 1
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120518469 (scfd1)
Membrane trafficking [BR:
psex04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
120518469 (scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
120518469 (scfd1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
120518469
NCBI-ProteinID:
XP_039597197
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Position
18:5650260..5831283
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AA seq
617 aa
AA seq
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MLNFNSPLMKNTAAEPVWKVLIYDRFGQDIISPLLAVKELRDMGITLHLLLHSDRDAIPD
VPAIYFVMPTEENIDRICQDLRSQLYESYYLNFISAISRSKLEDIASAALGANAVTQITK
VFDQYLNFITLEDDMFVLCNQNKELISYHAINKSDITDTDMETIMDTIVDSLFCFLVTLG
AVPILRCPRGNAAEMVAVKLDKKLRENLRDARNSLFTSDTMGTGQFSFQRPLLVLLDRNL
DLATPLHHTWTYQALVHDVLDFHLNRVTMEESTGPENSPAGARPKKKNKKNYDLTAADRF
WQKHKGSPFPEVAESVQQELDTYRAQEDEVKRLKSIMGLEGEDEGAICMLSDNTAKLTSA
VSSLPELLEKKRLIDLHTNVATAVLEHIKTRKLDVYFEYEEKLMSKSTLDKSLLDMISDP
DAGTPEDKMRLFLIYYITSQQPPSEVDMEQYRKALADAGCNLSPLNYIRQWKAFAKMAAA
PANYGGSGAKAMGLFSRVMNTGSQFVMEGVKNLVLKQHNLPVTRILDNLMEMKSNPETDD
YRYFDPKMLRGSESSVPRNKNPFQEAIIFVVGGGNYIEYQNLVDYVKGKPGKHVLYGCSE
LFNASQFLKQLSQLGQK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgctaaattttaattctcctctgatgaaaaacaccgcagcagagccagtatggaaggtt
cttatttatgaccgatttggacaagatattatttctcctttgctggctgtcaaggaacta
agggacatgggcataaccttgcacttattacttcactctgatcgagatgcaatccctgat
gtaccagccatttattttgtgatgcccacagaagaaaacattgataggatatgccaggat
cttcgaagtcaactatatgagtcttactacttgaacttcatttctgccatttcaagaagc
aaacttgaagacattgcaagtgccgctctgggagcaaatgcagtcacccaaatcactaaa
gtttttgatcagtatctcaactttattacactggaggatgacatgtttgttctctgcaat
caaaacaaagagctcatctcataccacgccattaacaagtccgacatcactgacacagac
atggaaaccataatggacacaatagttgacagtcttttttgcttcttagttactctgggt
gctgtgcccatacttagatgtccgagagggaatgcagcagaaatggttgctgtgaaactg
gacaagaagctcagagaaaacctcagagatgcaagaaacagcctctttacaagtgacacg
atgggaactggacagttcagcttccagagacctttactagtccttttagacagaaattta
gatttggctactccattgcaccacacgtggacgtatcaagccctggtgcatgatgttctg
gatttccatttgaaccgagtaaccatggaggaatccacaggcccagaaaactccccagct
ggggctcgaccgaaaaaaaagaacaagaaaaattatgatttgacagcggctgatcggttt
tggcaaaagcataaaggaagcccttttccagaagtagccgaatccgtgcaacaagaactc
gatacctacagggctcaggaagacgaagtgaagcgcctgaaaagcatcatgggtcttgaa
ggtgaagatgaaggcgcaatctgcatgttatcagacaacacggcaaagctgacttctgca
gtaagttctttaccggaattgctagagaagaagaggctgattgaccttcacacaaatgtt
gcaactgctgtcttggagcacattaagacaagaaagcttgatgtgtactttgaatatgaa
gagaaactcatgagcaagtccactctggacaagtctctgctggacatgatcagcgatccc
gacgcgggaaccccagaagacaagatgagacttttcttaatctactacatcacatcccag
caaccgccatctgaggttgatatggaacaatatagaaaagcgttggcagatgctggatgc
aatctttctcctttaaactacatccgacaatggaaagcatttgccaagatggctgcagca
ccagcaaactatggaggaagtggagctaaagccatggggctgttttcaagagtaatgaac
acaggctcacagtttgtgatggaaggagtaaagaatttagtactgaaacagcataattta
ccagtgacccgcatcctggataaccttatggagatgaaatccaaccctgaaacggacgat
tacagatactttgatcccaaaatgctccgtggcagtgaaagttctgttccaagaaacaag
aatccattccaagaggcaattatatttgtggttggcggaggaaactacattgaatatcaa
aatcttgtggactatgttaaggggaagccgggtaaacacgtgctgtatggctgcagtgag
ctttttaacgcctcccagtttcttaaacagttgtctcagctgggtcagaagtaa
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