Polypterus senegalus (gray bichir): 120518561
Help
Entry
120518561 CDS
T08668
Symbol
rpap1
Name
(RefSeq) RNA polymerase II-associated protein 1
KO
K20826
RNA polymerase II-associated protein 1
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psex03021
]
120518561 (rpap1)
Transcription machinery [BR:
psex03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120518561 (rpap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
120518561
NCBI-ProteinID:
XP_039597354
LinkDB
All DBs
Position
18:33666168..33740381
Genome browser
AA seq
1398 aa
AA seq
DB search
MLPRPKPGDSEDDLLRYQEQFLASGSEPAVRIIRKVDKRKGETESSEGLNEQRNRDVVSI
QGFPEEPPPLNSVPPKKSRFKTQNVRFEDEDPEERINCHDKHVTVVLSKIIERDTSAVPV
TFPAFTGAAFPKACHRSEVQGQIPSPLGRKSIFAQKMMLQKAKENGMLAKEASQSAMERI
PTRASDDVEMKMQIHQHPDPTSGLISGDGLGKPDSASEVKQIQWENEQRLKSMSEVEILE
EQRKLISQLDPRLVAFVKSKISSASLTNTDLEMSRSDKQSSENEEIMELETTAVMEDESS
DQDLCPPITVDELPVKPKEGWVHMDKLEPEKLEWLRDLPPSRKKGTKKAMQARFDFSGSL
IPPTADLPTHLGLHHHGEEPELAGYSLQELFHLSRSKVTQQRTLAFNTLARVLHKVHLGE
LASMVKGRIISTLLDAGLLFLLRFALDDNVEVVIAGAVRALWALLVVPNDEECLDRTFSW
LHGMFTFPLLPMEESDDEEEDEVDEDGKKETVEEKEARKQDHEVAQADIIKGLLKMKLLP
RLRYILEVVRPGPRVVQDVLEILIRICRHSAAAASQVLDCPRLMGTIISEFLPCSWTSPS
MSGHRPTLERPHGLPVAAAMKLIRVLASTGRHACARLLNNYKIRARLLRFIAVEPEDLLL
EACEAKKLSLEALRMWCVAAGYGQACDLYRDMYPVLIRMLQSIPQLMSKETSLEPFSNLT
LQRTETLLLLLTTVTQTAGSTEELKANQMGDSESALPPPPPLDWSQVAGLQPFIKASLKT
CLRWLAEPSHWENVHMLAAAHLVYLGSFYSQLYVQSTFCPVDTLQEIEALTSEVLLPLTG
HQTVLNMIDHLRQFSALCAPTSCAASREIIHGLPGFGCSEGINVGNLSDAKSPFPFLMGL
FYVLDSITNVHKGLACKFFNVLVAPRLLDYLCSSCSALPSFSLSSAWLFRHEYHLQYLLL
KLAFKQMPLKTEVSQQITVYHKIAMAMLPRLLPGSEYQAHELLSTMIFNPSFIPEGRCGG
PEAVDLSQLLRLRDGDQCSLFTESTTGTLLREAYANLASLRGCYLTHLAHLEPSVLRSRD
IYLGHTPFVCSQMLSELTGPVVPSDWAFLPLVCLYEQTTKEESSGRTVESVSVTSTEAVT
HCLQWLLILETWHEDALKSVPPAAKFCRLACIFLSGSDLFRERPVQRFLWALLLALCRPT
QLNALDLTVPPPGLASFHDFYSSLLVQFEAVSFGDPLFGCFLLVPLQRHYSTELKLAVFG
EHIGLLRSLGVSLAQLPIPLERFTSPPEDSLPLLRSYFRALVTGSLRLAWCPVLYAVAVA
HVNAFIFSQDTKNEEIDMERKSLLRKTYFLTDEVLKNHLLLFKMPRADIKLGFEMFEKLP
PIRDKRLNAVLRKENGTD
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctcgtccaaaaccaggggactctgaagatgatttgcttcgataccaggagcag
ttcctggcttcagggtctgaaccagctgtccgtattatacgcaaagttgacaagcgcaaa
ggagaaaccgagtcctcggagggactgaatgaacaacggaatagagatgttgtctccatt
caaggattcccagaagagcctccaccactgaactctgtaccaccaaaaaagtcccgcttc
aagacacaaaatgtgcggtttgaagatgaagatccagaagaacggataaattgtcatgac
aagcatgtcactgttgttctgtctaaaatcattgagcgtgacacaagtgctgttcctgta
actttcccagcatttactggagctgcatttcccaaagcctgtcatagatcagaggtgcaa
gggcagataccttctcctttgggcagaaagagtatatttgcacagaaaatgatgctacaa
aaagctaaagaaaatggcatgctagccaaagaagcatcacagtctgccatggaaagaata
cccactagagcatcagatgatgtggagatgaaaatgcagatacatcagcatcctgatcct
acatcaggacttatttcaggggatggtcttggtaagccagatagtgcgtcagaggtgaag
cagattcaatgggagaatgagcaacgactaaagagcatgtcagaggttgagattctggaa
gaacagagaaagctgatctcacagcttgatcctaggctggtggcttttgtgaagtccaag
atatcttcagcctctttgacaaacacagatttagaaatgagtagatcggataagcaaagc
tcagagaatgaagaaattatggaattggagacaacggcagtaatggaggatgaaagcagc
gaccaagacttatgtcctccaataacagttgacgagttgcctgtaaaacccaaagaaggt
tgggttcacatggacaaattagaaccagaaaaacttgaatggctcagggacctccctcca
tcacgaaaaaaggggacaaagaaggcaatgcaggctcgttttgatttctctggatcattg
atcccaccaactgctgacctgccaacacatcttggactgcaccaccatggagaagagcca
gagcttgctggctattcactgcaggagctcttccacctttctcgcagtaaggtgactcaa
cagcgcacactggcttttaatactctggcacgtgtcttgcataaggtacatcttggagaa
ttagcatctatggtgaagggtagaatcatatccactcttctggatgctggtcttttgttc
ctgcttcgctttgctttggatgacaatgtggaagttgtaattgcaggtgcagttcgagct
ctttgggcactgctggttgtccctaatgatgaggaatgtcttgaccgaacattctcttgg
cttcatggaatgttcacatttcccttattgccaatggaagagtctgatgatgaagaagag
gatgaggtagatgaagatggcaaaaaggagacagtggaggaaaaggaggctagaaagcaa
gatcatgaggtggcccaggcagatatcatcaagggccttttgaaaatgaagttgctgcct
aggctgaggtatattttagaagttgttcgcccgggccccagagtggttcaggacgtgctg
gaaatcttaattaggatctgtcgccattcagctgctgctgctagccaggtattggattgt
cctcggcttatgggaacaataatatcagaatttctcccctgttcatggacatccccttca
atgtcaggacatagacccacattggaaaggccacatggcttgcctgttgcagcagcaatg
aagctgataagagtgctggccagtactgggaggcatgcctgtgctaggctgctgaacaac
tacaagatcagagcacgtttgttacgctttattgcagtggagccagaagatctgctttta
gaagcttgtgaggcaaagaaactgagccttgaagctttgaggatgtggtgtgttgcagct
ggatatggacaggcttgtgatttgtatagggatatgtatcctgtcctcataagaatgctt
cagtctattccacagctgatgtctaaagagacatctttggagcctttctcgaaccttact
cttcagagaacagagactctgttgttattgctcacaacagtcacacaaactgctggttct
acagaggaattaaaggctaaccagatgggtgactctgaaagtgccctcccgcctcctcct
cctctggactggagtcaagtggctggactgcaacccttcattaaagcatccctgaaaacc
tgtctgcggtggctagcagaacccagtcactgggaaaatgtacacatgttggcagcagct
cacttggtctacctggggtccttctattcacagctgtatgtgcagagcactttctgccca
gtggataccctccaggagatagaggctttaacttcagaggtcctgcttcctcttacaggt
catcaaactgtactaaatatgatcgatcatcttaggcagttttctgcactctgtgcccca
acctcttgtgctgctagtcgagagattatacatggtcttccaggctttggctgcagtgaa
ggaataaatgttggcaacctttcagatgcaaaatccccatttccctttctgatgggtcta
ttctatgtccttgattctatcactaatgtgcataaaggacttgcttgcaagttttttaat
gtacttgttgctccacgacttctggattatctttgttcaagctgctcagcattgcccagt
ttttctctgtccagtgcatggttatttcgacatgaatatcatcttcagtatcttttgctg
aagcttgcttttaaacagatgccattaaagacagaggtatcacagcagataacagtttac
cacaaaatcgctatggcaatgctgcctcgactgttgcctggcagtgaatatcaagcacat
gaacttttgtctactatgatttttaaccccagtttcatccctgagggacgctgtggtggc
ccagaagcagtagatctttcacagctgcttcgccttagagatggggaccagtgctcttta
tttaccgagtccacgacaggcactttgttacgggaggcctatgccaatcttgcatctcta
cgaggatgttacttgactcacctggctcacttggaaccaagtgtcttacgatctagagat
atttatctaggccatacgccctttgtgtgttcccaaatgctgtctgagctcacaggacca
gttgttccttctgattgggcttttcttcctcttgtatgcctatatgaacaaactacaaag
gaggagtcaagcggaagaactgtggagtcagtatcagttacctccacggaagcagtcaca
cactgtctacagtggcttctgatcttggagacctggcatgaggatgctttgaagtctgtt
cctcctgctgcaaagttttgtcgccttgcctgcatcttcctctcaggcagtgatctgttt
cgggagcgtcctgtgcagcgcttcctttgggctttgctccttgctctgtgtagaccaact
cagttaaatgctctagatttaacagtgcctcctcctggtctggcctcatttcatgacttc
tattcgtccctgcttgtgcagtttgaagcagtttcttttggtgatcccctctttggttgt
tttctacttgttccactccagcgccattacagtacagaactgaaacttgctgtatttgga
gagcacattggccttttgcgctctttgggtgtgagtcttgcacagttgcccattccattg
gaaaggttcacttctcctcctgaagattctctgcccctactgcggtcatacttccgggca
ctagtaacaggatccttacgacttgcatggtgtccagtcttatatgctgttgccgttgct
catgtgaacgccttcatcttttcacaagacacaaaaaacgaggaaatcgacatggaaaga
aaaagcttgctgaggaagacatactttctgacagatgaggttttgaagaatcatcttctt
ctcttcaagatgcccagagcagacatcaagcttggttttgaaatgtttgagaagctcccc
cctattagagataagagactaaatgctgtccttaggaaggagaatggcactgattaa
DBGET
integrated database retrieval system
