Polypterus senegalus (gray bichir): 120518586
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Entry
120518586 CDS
T08668
Symbol
ino80
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120518586 (ino80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120518586 (ino80)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
120518586 (ino80)
INO80 complex (yeast)
120518586 (ino80)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
120518586
NCBI-ProteinID:
XP_039597391
LinkDB
All DBs
Position
18:23344692..23527682
Genome browser
AA seq
1551 aa
AA seq
DB search
MASELDEAEDGGYTELARPLHMQYLERALKLDTFLRQTAAFFNKNASSEDSDDGLEHDSS
LVNSESCSSLLLVKEKTLGQDEDQSCRTGESQTMPESNSLNGALMQDHKIDKGSLYNFSK
LKKTRKWLKGILLSDDTTDTDSDTDDEEFTLSKEELQDMLRLHKFKKLHQNKFSLDKELQ
QYQYYSVGVLSTHDPFYEQQRHLLGPRKKKIKEEKKLKAKLKKVKKKKKRDEDYAAEGWQ
YPTKIFAKFSQDSPTPVSKKKHLTIEQLMARRKKVWLTIAKKENPKAFKQKVSARNLVLT
NAKKLAHQCMREVRRAAIQAQKNCKETLPRARRLTKEMLLYWKKYEKVEKEHRKRAEKEA
LEQRKLDEEMREAKRQQRKLNFLITQTELYAHFMSRKRNMGSDGMQEEILRKLEDNSMLR
QIDIGGGVMVNVSHEDYDSEYYKSQALKNAEDAYQIHQARTRMFDEEAKDSRSASLQVAN
NTGTGFGESYSLANPSIRAGEDIPQPTIFHGKLKGYQLKGMNWLANLYEQGINGILADEM
GLGKTVQSIALLAHLAERDNIWGPFLIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDR
KVIRKFWSQKTLYTQDAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSASVRW
KILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSRDIESHAENKS
AIDENQLSRLHMILKPFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLYQALKNKISIE
DLLQSSMGTTQQAQNTTSSLMNLVMQFRKVCNHPDLFERQETRSPFHMSLKPYIMSKFLF
RNGLISTFNQCRSRLLQVLLSPFAPDHIHQSLMHRKGNDESSCFSFLRFIDVSPSDMNNI
MLQGTLIRWLALFLSLKSSYRLYHKRQWDANGDEGSNAKSNYLVNKALILWVNSPTSFVN
VNSSPVLQELIFTRHTKAVVGHTDIIVHRRKSATSTIRHCQETELPKFLFCSIPRVSAVP
MEQYCNDRSAEYEWAAMKEGGNFMAKQCFLYGDPALATNRVGRLPEFFPESPGGVMAINP
RHGWSFIKIPDKESLITDSGKLHTLDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRK
HTYMRLDGSSKISERRDMVADFQSRTDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPT
VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLKP
KEVVSLLLDDEELEKKLRQRQEEKRQQEESSKVKDRKRKREKYAEKKKKEDEMDIKRRKE
GMNIVIPFLPSADNSNLSADGDDSFISVDSALPSPFSEISMSSELQAGSIPPDESSSDML
VIVDDPMSSAPQSRATNSPASVTGSVSDNMNGVSSQDTCSPGRGRSGRSRGRPKGSSGGT
KSAGKGRSRKSTAGSAAAMAGAMAGAAAASAAAYAAYGYSVSKGIGNTSTLQPSLARSSC
TGNFLPSGSSSPLTSPQGKAGIVPSSPQTISHVNPATINRKHKGLSSLGGR
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagagcttgatgaagctgaagatggtggctatactgaactggctagacctctt
catatgcagtatctggaacgcgccttaaaacttgacactttcttgcgacagactgctgct
ttcttcaataaaaatgcttcaagtgaagacagtgacgatggtttagagcatgactcctcc
ttggtgaactcagaatcctgctcttctttactgctggtgaaagagaaaacattaggacaa
gatgaagatcagtcttgtagaaccggggaatcacaaactatgccagaatctaattcgctc
aatggagctctcatgcaagatcacaaaatagataaaggaagtttatacaacttttcaaag
ttaaagaaaacaagaaaatggctgaagggtattttattgagtgatgacacaactgatact
gactctgatacagatgatgaggagttcactttatccaaggaagagttgcaggatatgctt
aggttgcacaaattcaaaaagctgcatcagaacaagttcagtcttgacaaagagttacag
cagtatcagtactacagtgttggtgttctctccactcatgatcctttctatgaacaacag
cggcacttactggggcccaggaaaaagaaaattaaggaggagaagaaattaaaagcaaaa
ttaaagaaagtgaaaaagaaaaagaaacgtgatgaagactatgctgctgaaggatggcag
tatccaacaaaaatatttgcaaagttttcccaagatagtccgactcctgtgtctaaaaag
aaacacttgacaattgaacagctaatggcaaggagaaagaaagtctggctaactattgcc
aaaaaagaaaatccgaaggcattcaagcagaaagtttcagctagaaatcttgttctaaca
aatgcaaaaaagttggcccaccagtgtatgcgagaagttcgcagggcagccatccaggct
cagaaaaactgcaaggaaaccttgccacgagccagacggctaaccaaggagatgctgctt
tactggaagaagtatgagaaggttgagaaggagcatcgtaagcgagcagaaaaagaggct
ttggagcaacgaaagctagatgaagaaatgagggaggcaaagaggcaacaaagaaagctg
aactttctgattactcagacagagctttatgcacatttcatgagtcggaagcgcaatatg
gggagcgatggaatgcaggaagagatccttaggaaactggaggacaactcgatgcttcgg
cagattgacattggtggtggcgtgatggtcaatgtcagccatgaggactatgacagtgaa
tattataagtctcaagctctgaagaatgcagaggacgcataccagattcaccaggccagg
acaagaatgtttgatgaagaagccaaagacagtcgatcagcatctttgcaagtagcaaat
aatacaggaacaggttttggagagagttacagtctagccaacccatccattcgtgctgga
gaagacattcctcagccaactatctttcatggcaagctaaaaggctaccagctgaagggt
atgaactggcttgctaatctctatgaacagggtattaatggcatcttagctgatgaaatg
gggttgggcaaaactgtacaaagcattgcacttttggcacacttagctgaacgtgacaac
atctgggggccatttctaataatatctcctgcttctacactaaacaactggcatcaagag
tttacaagatttgttccaaaatttaaggtattaccttattggggaaatccccatgacagg
aaggtaattcgtaaattttggagtcagaaaactctttatactcaagatgccccctttcat
gtggttataaccagctatcaacttgttgtacaagacgtgaagtattttcagcgtgtaaag
tggcagtacatggtactggatgaagcccaagcactaaaaagcagtgccagtgttcgatgg
aagattttgttgcagtttcagtgtcgtaatcgtcttctgttgactggaaccccaatacaa
aacacaatggctgagctctgggcccttctgcacttcatcatgcctacgttgtttgactcc
catgaagaattcaatgaatggttttcacgggatattgaaagtcacgcagagaacaagtct
gccattgatgagaaccagctgtctcggttgcacatgattttaaaaccattcatgctgaga
cgaatcaaaaaagatgtagaaaatgagctttctgataagattgaaattctgatgtattgc
caactgacaagccggcagaagcttttgtatcaagccttaaagaacaaaatttcaattgag
gaccttttgcagtcttccatgggaacaacacaacaggcccaaaacacaacaagtagttta
atgaaccttgtcatgcaatttcgaaaggtgtgcaatcatcctgacttatttgaaagacag
gaaacaagatctccatttcatatgtctctgaaaccctacataatgtccaagtttctcttc
cgaaatggccttatttccactttcaatcaatgtcgatctaggttattacaagtgttgctg
tcaccatttgcaccagatcacattcatcagtcattaatgcatagaaaaggaaatgatgaa
agtagttgtttttctttcttgagatttatcgatgtttctccttctgatatgaataacatt
atgcttcagggaaccttaatcaggtggttagcactttttttatcacttaagtcttcatac
cggctttaccacaaacggcagtgggatgccaacggagatgaaggaagcaatgccaaatct
aactaccttgtcaacaaagctctcattctttgggtgaactcaccaacatcttttgtgaat
gtgaacagcagccctgtattacaggagctcatttttactaggcacactaaagcggtagtg
ggccatacagacatcattgtgcatcgaagaaaatcggctacctcaaccattagacattgc
caggagacagagcttcctaaatttcttttttgctccatacctcgggtgtctgcagtccca
atggaacagtactgtaatgaccgtagtgctgagtatgaatgggcggcaatgaaggaaggt
ggaaatttcatggcgaagcaatgcttcttgtatggtgatccagcgcttgcaactaacaga
gtgggaagacttccagaattctttccagaaagtcctggaggtgtcatggccattaaccct
cgacatggctggtcattcattaagataccagacaaggagagtttgataacagacagcggg
aaacttcacactctggacctgctgttgacacgactcaagtcgcaaggacacagagttctc
atctactctcagatgacaaggatgattgatcttcttgaggaatatatggtttatcgcaag
catacgtacatgagactagatggatcctcaaaaatttctgagaggcgagacatggtggca
gatttccagagccgaacggacatctttgtgttccttttaagcacaagagctggtggtttg
ggaattaacctaacagcggctgacactgtcatattttatgacagtgactggaacccaact
gtagatcagcaagccatggacagagcgcacaggctgggtcagactaagcaagtgactgtt
tatcggctaatttgtaagggaacaattgaagaaagaatattacagagagcaaaagagaag
agtgagattcagcgaatggtcatctcagggggcaattttaaacccgacactctgaaacca
aaggaagtagtgagcctgcttttggatgatgaggaacttgagaagaaattacgacagcga
caagaagaaaaaaggcaacaggaagagtccagcaaagtaaaagatcgcaagagaaaaaga
gaaaaatatgcagaaaagaagaagaaggaagatgaaatggatattaaaaggaggaaagag
ggcatgaatatagtcattccattcctaccctctgcggacaattctaatctttcagctgat
ggagatgactcctttatcagtgtggattcagcactaccaagtcccttcagtgaaatttca
atgagcagtgagcttcaagctggatcaatcccacctgacgagagcagtagtgatatgttg
gttattgttgatgatccaatgtcatctgctccacaatctcgagcaacaaactcccctgca
tctgttactgggtctgtctcagacaacatgaatggagtttcatctcaagacacctgtagc
cctggtagggggcgctctgggagaagccgtggacgccctaaaggctcaagcggagggacc
aagtcagcaggaaaaggaaggagccgcaagtcaacagctggtagtgcagcagctatggca
ggagccatggcaggagcagcggcagcctctgcagcagcgtatgcagcatatggctacagt
gtatcaaaaggtatcgggaacaccagcacactgcagccttcacttgcaagatccagctgt
actggtaattttctaccctcaggctcgtcctcccctctcacatctcctcagggtaaagca
ggcattgtcccttctagtcctcaaactattagccatgtcaatcctgccacgataaacaga
aaacacaaaggactgagttcactaggaggaaggtag
DBGET
integrated database retrieval system
