Polypterus senegalus (gray bichir): 120518655
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Entry
120518655 CDS
T08668
Symbol
lrfn5a
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psex04990
]
120518655 (lrfn5a)
Domain-containing proteins not elsewhere classified [BR:
psex04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
120518655 (lrfn5a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
Ig_2
fn3
DHU1_N
Sp38
DUF6479
Motif
Other DBs
NCBI-GeneID:
120518655
NCBI-ProteinID:
XP_039597490
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All DBs
Position
18:complement(82741264..82933794)
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AA seq
779 aa
AA seq
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MEKLLFYLLVIGMAVKAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLAD
NFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTRISNDIFS
GLSNLHHLILNNNQLTTILPEAFNDVLSLEELDISYNNLETVPWEAVERMTSLHTFSLDH
NMIDHIPEGTFSHLHKLTRLDVTSNKLQKLPPDPLFQRAQVLATSEILSPSSFALSFGGN
PLHCNCELLWLRRLTREDDLETCATPLHLSGRYFWSIPEEEFLCEPPLITRHTHEMRVLE
GQRATLRCKARGDPEPAIHWISPDGKLISNSSRALVYDNGTLDILITTVKDTGSFTCISS
NPAGEATQTVDLNIIKLPHLINSTNNFQEPDPGSSDISTSTKSGSNASSNAGDSKSSQDK
RVVIAETTSSTALIKFNFQRNIPGIRMFQIQYNGTYDDSLVYRMIPPTSKNFLVNNLAAG
TLYDLCVLAIYDDGITSLTATRVVGCIQFTTEQDYVRCHFMQSQFLGGTMIIIIGGIIVA
SVLVFIIILMIRYKVCNNSDPNKATKVSNVYSQTNGAQAQSCGGSLPHSSSKQALGQDET
AQCHKTHLGETVTHSSETSSSIPECSTTTSMMAQNWTSSSSGSLKPKRKAGTKASPEPKI
EALPNAETQNTNRNNSTALQQSSCSPVLQAKETPTFKRVHSKPNKYLTLPADSLRAKRRY
SLNEDLSKYHCCISSQRLGSLWSKRSLSMNGMLLQLEGSDVDSGKATFSSSEWILESTV
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgcttttctatctgctggttattggcatggcagttaaagcccagatctgt
ccaaaacgctgtgtctgtcagattttatctcccaaccttgcaacgctctgtgccaaaaaa
ggtcttctgtttgtcccacctaacattgatcggcgtaccgtggagttacgtttggctgat
aactttgtcacaaacatcaaaagaaaagactttgccaacatgaccagccttgtggatctt
accttgtcaaggaatacaataagtttcattacgccccatgctttcgcagatcttcgcaat
ctacgggccctgcacctcaacagcaatcgattaactagaatttccaatgatatatttagt
gggctttctaatcttcaccaccttattctcaataacaatcagcttactacaatcctacca
gaggcatttaatgatgttttatcattggaagagctggatatatcttataataacttggag
accgttccctgggaagctgttgagaggatgactagcttgcacaccttcagtcttgaccac
aacatgattgaccacatccccgagggcaccttttcacacctccataaactaacccgtttg
gatgttacttccaacaaactccagaagctgccaccggaccccctctttcagcgtgctcag
gttctggccacatctgagatcctgagcccctcatcttttgcacttagttttggaggtaat
cccctgcactgcaattgtgagttgctttggctaaggcgccttacgagggaagatgatcta
gaaacatgcgctacaccattacatttgtctggccggtatttttggtccatccctgaagag
gaattcttgtgtgaaccccctctgatcactcgtcacacacatgaaatgcgagtcctggag
ggccaaagggcaaccttaaggtgcaaagcaagaggtgatcctgaacctgctatccactgg
atatcgcctgatggtaaacttatttctaattcttctagagcgcttgtctatgacaacgga
accttggacattcttatcacaactgtaaaagatacgggttctttcacttgcatctcctcc
aatccagctggtgaagcaacccaaacagttgacctaaacattattaagctgccccacttg
ataaacagcacaaataattttcaagaaccggatcctggctcctcagacatctctacttcg
actaagtctgggtccaatgctagcagtaatgcgggagactcaaagagtagccaagacaaa
agggtagtaattgccgagacaacttcgtcaacagcgcttattaaattcaactttcaaagg
aacatccctggtattcgcatgtttcagattcagtataacggcacatatgatgattccctt
gtttacagaatgattccgcccacaagcaaaaactttcttgttaacaacttggctgctgga
accctctacgacctgtgtgtcctggctatctacgatgatggaattacctccctgactgca
actagagttgtggggtgcattcagttcacaacagaacaggattatgtccgctgtcacttt
atgcaatcacagtttcttggtggtacaatgattattattatagggggcatcattgtggct
tcagtccttgtcttcattattattctgatgattcgctacaaagtgtgcaacaacagtgat
ccaaacaaggccacaaaggttagcaatgtttattcacaaaccaatggggcacaagcccag
agttgcggggggtctttaccacactcgagctcgaagcaggctttggggcaggatgagact
gctcagtgtcacaagactcatcttggtgagactgtgacccattcttcagagacatcctcc
tctatcccagaatgctccaccactacctctatgatggcccagaactggacctccagctcc
tctggctctttaaagccaaaacgaaaggccgggacaaaggcatcgccagagcccaagatt
gaggcacttcctaatgccgagactcagaatacgaatcggaataattccactgcattacag
cagtcaagctgctctcctgtgctgcaagccaaggaaacccccacttttaaacgagtacac
tctaaacctaataaatacctgaccttgccagcagacagcctgagagctaagcgcaggtat
tctttaaacgaagacttgtctaaataccactgctgtataagttcccaaaggttggggagc
ttgtggtccaaaagaagcctatcaatgaatggcatgctattacaattagaaggttcagac
gtggacagtgggaaggcaacattttcaagttcggagtggatactggaaagcactgtgtga
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