Polypterus senegalus (gray bichir): 120518673
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Entry
120518673 CDS
T08668
Name
(RefSeq) homeobox protein six1b
KO
K15614
homeobox protein SIX1
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120518673
Transcription factors [BR:
psex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
120518673
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
120518673
NCBI-ProteinID:
XP_039597519
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All DBs
Position
18:complement(31464023..31467335)
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AA seq
275 aa
AA seq
DB search
MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENSENNNSGGSKQNQLSPLDGAKSLMSSSEDDFSPPQSPDQNSVLLLQGNMNH
SGGSTYPMSSLQGHPHQLQDSLLGPLTSSLVDLGS
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgctgccctcgtttgggtttacccaggagcaagtggcctgcgtgtgtgaggta
cttcaacaggggggcaatttggaacgactgggtcgctttttgtggtccctgccagcatgc
gatcacctgcacaagaacgagagtgttctcaaagctaaggcagtggtggctttccaccgg
ggaaacttccgagagctctacaaaatattagagagtcaccagttttcgccgcacaatcat
cccaaactccagcagctttggctgaaggctcactacgtggaggcggaaaagttgcgaggc
agacctttgggtgcagtgggcaagtacagagtgcggagaaaattcccgctgcccaggacc
atttgggacggggaggaaacgagttactgctttaaggaaaagtcccggggggttctgagg
gaatggtacacccacaatccgtacccgtcgccccgggagaagagagaactggccgaggcc
actggactaacaaccacgcaggttagcaactggttcaagaacagaaggcagcgagatcgc
gccgccgaggcgaaagaacgggagaacagtgagaacaataattcaggaggcagtaaacag
aaccagctgtcccctctggatggggccaagtccctgatgtcaagctctgaagatgacttc
tctccaccgcaaagccctgatcagaactcggtcctgctgctacaggggaacatgaatcac
agtgggggctccacgtacccaatgagcagccttcaaggacatccacaccagctgcaggac
tctcttcttggacccctcacatccagtctggtggatcttggctcctaa
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