Polypterus senegalus (gray bichir): 120518868
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Entry
120518868 CDS
T08668
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120518868 (msh4)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Meiosis-specific proteins
Others
120518868 (msh4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_29
AAA_22
AAA_23
AAA_27
ATPase_2
Motif
Other DBs
NCBI-GeneID:
120518868
NCBI-ProteinID:
XP_039597804
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Position
18:complement(36623112..36673138)
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AA seq
874 aa
AA seq
DB search
MRGGIVSGDSCFADRSSNPGLISTKNLTSESSGFSAWSSSTPCFKKTAVPVKSHGPASAL
RTRTPQTENPVTTTSTLSSVPAASIIVAIVEGRGLARGEIGMACIDLKNPELMLFQFADT
GTYAKVVTKLHILSPLEILMPDTASDKGKGSKLFGLIVENFKNIAFTAVQRKYFSEGKGL
EYIQHLCAPEFSTVIMEVQAKYYCLSAVAALLKYIEFMQKSVYAPKSLKVIFRGSEQTTM
IDSTSARNLELVVNNKDPRSEHTLLGVLNYTKTPGGGRRLRSNILEPLYDIDTINTRLDS
LQELLQDEELFFGMKAVIGRFLDTDQLLSVLVQIPKQETVQVAETKITHVIHLKHTLELV
SPLKMMLKNCQTPLLQAYGRSLEDDRFNTILEQIKTVINDETCYMKGSLNMRTQKCYAVR
PNINEFLDISRRVYTEIVDDIAGMVTKLGEKYGLPLRTSFSTTRRFFIQMKLDAGGLQGG
QFPIEFIKVTRFKNNYCFTTIDLIKLNDRCDEALKEIFHMSYVVVCQLLSLVHEHVHCLY
KLSDTVSMLDMLLSLAHACTVSDYVRPEFTDTLAIKEGRHPILERISSQQPVSNSTYIFE
GSNFTLITGPNMSGKSTYLKQVVLCQIMAQIGAFVPAEYASFRIADQIFTRIGIDDDFET
SSSTFMVEMKEITYIIRNATDQSLIIIDELGRGTNAEEGTGICHAVCEFLLSLKAFTLFA
THFLEICQLQTLYPNVENYHMEVHHTCSAAGNSEKITYSYLLKKGRSEERNYGLKAANVS
ALPQSIIEEAKNITFHINKQLWEQQHSDPEAKKERAMYHLAMRLHQAAKNSQLESDNLRM
FLKGLKRYYIAELCTVEGAASLNTEKTAASLTDE
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggcggcatcgtgtctggagactcctgctttgctgaccgaagctcaaatccagga
ttaataagtacaaaaaacctcacctcagaaagcagtggtttctcagcatggagttccagt
actccctgcttcaagaagactgcagtcccagtaaaatcgcatggaccagcatctgcactt
cggacacgtacaccacaaacagagaatccagtgaccaccacatccactctgtcctctgtt
ccggctgcctccataattgttgctatagtagaaggacgtggtcttgcccgaggagagata
gggatggcatgtattgacttgaagaatccagaactgatgctcttccaatttgcagacact
ggaacttatgctaaagttgtaacaaaacttcacatcttaagtccattggaaatattaatg
ccagatacagcaagtgataaaggcaaagggtcaaagctatttggtttgattgtagaaaac
ttcaagaacatagctttcactgcagttcagaggaaatacttcagtgagggaaaaggcttg
gaatatattcagcatctttgtgccccagaattcagcacagtaataatggaagttcaagct
aaatactattgcctatctgctgttgcagctctattaaaatatattgagtttatgcaaaag
tctgtgtatgctcccaaatcactaaaagtgatttttagaggcagtgagcaaacaacaatg
attgactccacatcagccaggaatttggaacttgtggttaataacaaggacccccggagt
gaacacacattgttgggagtgcttaattacacaaagacgcctggtggtggccgcagatta
cggtctaacatcttggagcctttatatgacattgacaccattaacactcgcctggacagt
ttacaagaactgctacaggatgaagaactcttctttggtatgaaagcagtaattggacgt
tttctggacacagaccagctgctctctgttttggtacagattcctaagcaggaaacagta
caggtagcagaaacaaaaataacacacgtgattcacttaaagcacacattggaattagta
tcaccattaaagatgatgctgaaaaattgccagactcccctgctgcaagcttatggaaga
tcattagaagatgatagatttaataccatcttggagcagattaaaactgtcatcaatgat
gaaacatgttatatgaaggggagtctgaacatgagaactcaaaagtgttatgcagttcgt
ccaaacatcaatgaatttcttgatatttctcgtcgtgtctacactgaaattgttgatgat
attgcaggcatggtgacaaaactgggagagaaatatggcttacctttgcgaactagcttt
agcacaactcgcagatttttcattcaaatgaagctcgatgcaggtggattacagggtgga
caattccctattgaatttattaaggtaactagatttaagaataattactgctttaccaca
atagatctgattaagctcaatgacagatgtgatgaggcactcaaagagatttttcatatg
tcttatgtggttgtttgccagttactgtctctagttcatgaacatgtgcattgcttatac
aagctgtccgatactgtctccatgcttgacatgctgctgtccctggcacatgcttgcact
gtatctgactatgtacgaccagaattcacagatacattagccatcaaagaaggcaggcac
ccaatactggagagaatttcaagccagcagcctgtttccaacagcacatatatctttgag
ggcagtaacttcactctgattacaggacccaacatgagtggaaaatctacataccttaag
caagtggtgctttgccaaattatggctcaaataggtgcatttgttcctgcagaatatgca
tcttttcggattgcagatcagatttttacaaggattggcatagatgatgactttgaaact
agttcatccacctttatggttgaaatgaaggagataacctacattattcgtaatgccact
gaccagtccctcatcattatagatgagcttggaagaggtacaaatgcagaggaaggcact
ggtatttgtcatgcagtctgtgagtttctgcttagtctgaaggctttcactctgtttgca
acacactttctggaaatctgccagctacagacactgtacccgaatgtggagaattaccat
atggaggtgcaccacacgtgcagtgctgctggtaattcagagaaaatcacatatagttac
cttctaaaaaagggaagatctgaagagagaaattatggactcaaggctgctaatgttagt
gcacttccacaatccattattgaggaagcaaagaatattacattccacatcaataagcag
ctttgggaacagcaacatagtgaccctgaagctaaaaaagaaagggctatgtaccatctg
gcaatgaggctccatcaggcggccaaaaactctcaactagaatcagataatcttaggatg
tttcttaaaggcctcaaaagatactatatagcagaactgtgtactgttgaaggggctgca
tccttgaatacagagaaaactgcagctagtttaactgatgagtaa
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