Polypterus senegalus (gray bichir): 120519083
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Entry
120519083 CDS
T08668
Symbol
srsf5b
Name
(RefSeq) serine and arginine rich splicing factor 5b isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03040
Spliceosome
psex05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120519083 (srsf5b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120519083 (srsf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psex03041
]
120519083 (srsf5b)
Spliceosome [BR:
psex03041
]
Common components
Common spliceosomal components
SR proteins
120519083 (srsf5b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
SET_assoc
Motif
Other DBs
NCBI-GeneID:
120519083
NCBI-ProteinID:
XP_039598108
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All DBs
Position
18:62600938..62606777
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AA seq
272 aa
AA seq
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MSGCRVFIGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDAEDAVYELDGK
ELCSERVTIEHARARVRGGARGRGGRYMDRYPRRSRDTRRCALSRNPPPVRTENRLIVEN
LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASHSDLRNALDKLSGKEINGRKI
KLFEAVKRRSRSHSRSRSSSHSRSRSRSRSRTRSPKSYSRSRSRSASRSASRSPAREKEE
KRLSRGRSSSPASPEQRRSRSESRSPSAESRN
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgagtggttgtcgagttttcattgggcgcttgaacccttcagcccgggagaaagacgtg
gagagattcttcaagggttacggccgcatccgggacattgatctaaaaagagggtttggc
tttgtggaatttgaagaccccagagatgctgaagatgctgtttatgagctggatgggaaa
gaattgtgtagtgagagggtaacgatagaacatgccagagcgcgggttcgtgggggtgct
agaggaaggggtggacgttacatggatcgctatcctcgtagatcacgtgatacacgaagg
tgtgcactcagtaggaatcccccgccagttcgcactgaaaatcgactgattgtagagaat
ttgtcctccagggtcagctggcaggatttgaaagattttatgagacaagcaggagaggtt
acttttgctgatgcacatagaccaaaactcaatgaaggagtggttgaatttgcttctcat
agtgatctgagaaatgcacttgataagctgtctgggaaggaaataaatgggaggaaaata
aagttgtttgaggctgttaaaagaaggtcaagaagccactctcgttcacgaagctcttcc
cattcccgttcacgttcaagaagccgttccagaacccgcagccctaaatcctatagtcgc
tctcggtcacgcagtgcctctcgttcagcaagtaggtcacctgcacgggaaaaagaggaa
aagcgtttatccagaggtcgttccagttctcctgcttctccagagcagaggcgttcaagg
tcagagtcacgatcgccatctgcggaaagtaggaactga
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