Polypterus senegalus (gray bichir): 120519140
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Entry
120519140 CDS
T08668
Symbol
hif1ab
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha b
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04137
Mitophagy - animal
psex04140
Autophagy - animal
psex04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120519140 (hif1ab)
04137 Mitophagy - animal
120519140 (hif1ab)
04148 Efferocytosis
120519140 (hif1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120519140 (hif1ab)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120519140 (hif1ab)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
MmgE_PrpD_C
Motif
Other DBs
NCBI-GeneID:
120519140
NCBI-ProteinID:
XP_039598212
UniProt:
T1Q067
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All DBs
Position
18:46110997..46151840
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AA seq
801 aa
AA seq
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MDVVPVTEKKRVSSERRKEKSRDAARCRRSKESEVFYELAHHLPLPHNVTSHLDKASIMR
LTISYLRVRKLLSQATEKLEESELDSQMNCFYLKALEGFVMVLSEDGDMVYLSENVNKCM
GLTQFELTGHSVFDFTHPCDHEELREVLTHRAGAAKKGKEVNTERSFFLRMKCTLTSRGR
TVNIKSATWKVLHCLGHIRAYESCEEQNDCGYKKPLVTSLVVICEPIPHPSNIEVPLDSK
TFLSRHSLEMKFSYCDERITELMGYQPEDLLGRSVYEYYHAMDSDHLTKTHHNLFAKGQA
TTGQYRMLAKNGGYVWVETQATVIYNSKNSQPQCIVCVNYVLSGVVEKDLIFSLSQTETL
PVKAIEDPELETVKVTGKTVPEGDGDSLFDKLKEEPEALTVLAPAAGDTIISLDFSTTES
EMSSFEEVPLYNDVMLPSPNEKMLMSPVSSAETVKPLRSSHDPALNLEVAVKMETNAEPL
ELSFSIPQIHNSRTSSSLQSSTQSSPGPNSPVDYSFEVDSDISSEFKLDLVEKLFAIDTE
AKTSFVSQAGDDLDLEMLAPYIPMDDDFQLRTMDQMSPMESLPSNPLIMENMNSLFQPAE
TSASSNSNTETFVLNTVEKNTKPLLRTVSPLHMIHNVQSLSDSSFSIQTNEAASLLNNSP
SAEKLDRHCNQSSIQTLLGKTICTLDEELSPRTCAQRKRKLQIADSLSKALEIGSVLPVT
EDSVGAWKRAKACKASEKVAPKHKTIILLPTDLASRLLASSFESSGLPQLTRYDCEVNAP
LQGRQNLLQGEELLRALDQVN
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgttccagttactgaaaagaaaagggtaagctctgagcgtaggaaagaaaaa
tcaagggatgcagctcgatgtcgaagaagcaaagaatctgaggttttttatgaactggcc
caccatctaccactcccacataatgttacatcacatttggataaagcctccataatgaga
ctaaccattagttatcttcgtgtaagaaaattgttaagtcaagcaacagagaaactggaa
gaatcagaattggattctcagatgaactgcttctaccttaaggctttggaaggatttgtt
atggtcctatctgaagatggcgatatggtttatttatcagagaatgtcaataaatgcatg
ggtcttactcagtttgagttgactggtcatagtgtgtttgatttcactcacccgtgtgat
catgaggagttgagagaagtgcttacacacagggcaggagcagcaaaaaagggcaaagaa
gttaacacagaaagaagtttcttccttagaatgaaatgtactctgaccagcagaggtcgg
acagtaaatatcaaatctgcaacatggaaggtgcttcattgtttaggtcacatacgtgct
tatgaatcttgtgaggagcagaatgactgtggatataagaaaccacttgtaacatctctg
gttgtaatttgtgaaccaattccacacccatcaaacattgaagtcccccttgacagcaaa
acatttctgagtcgtcacagtttagaaatgaagttttcttactgtgatgaaagaattact
gagttaatgggttatcaacctgaagacctgctggggcgctctgtatatgaatattaccat
gcaatggactctgaccatctgacaaaaacacatcacaacttgtttgccaaaggacaggct
acaacaggacagtaccgaatgttggcaaagaatggtggttatgtttgggttgaaactcag
gcaacagttatctacaactccaagaattctcaaccacaatgcatcgtatgtgtcaactat
gtcctgagtggtgtggttgaaaaggacttgatcttttctttgagtcagacagaaactctt
ccagtgaaagcaattgaagaccctgaactggaaactgttaaagtcactggcaagacagta
ccagaaggtgatggtgacagtttatttgataaattaaaggaagaaccagaggccttgact
gtgttggcccctgctgcaggagacaccataatttctttggacttcagcactacagaatca
gagatgtcatcatttgaggaagttccactgtacaatgatgtcatgttaccttcacccaat
gagaagatgcttatgtcacctgtctcgtcagcagaaactgtaaaaccacttcggagtagc
catgatccagctctaaatctggaggttgctgtaaagatggaaacaaacgcagagccttta
gaactttcattctccattccacaaattcacaattcaagaactagttcatcattacaaagt
agcacacagagctctcctgggccaaacagtccagtcgactacagctttgaagttgacagt
gatatttcctcagagtttaaattggatctggtggagaagctctttgctattgacactgaa
gctaagacatcatttgtttctcaggcaggtgatgacttagatttggaaatgctagctcct
tatataccaatggatgatgatttccagttacggacaatggaccagatgtctccaatggaa
tctttaccgtcaaatcctctaattatggaaaacatgaacagtcttttccagcctgcagag
acttctgccagttccaactcaaatactgaaacatttgtgttaaacacagtggaaaagaat
accaagcctctgctaagaacagtctctcccctccatatgattcacaatgttcagagttta
tcagattcctccttcagtatacaaaccaatgaagcggcatcattgctgaataattctcca
tctgcagaaaaactggaccggcactgtaaccagtcctccatacaaacactactgggcaaa
acgatatgcactttggatgaagaattgagccccaggacgtgtgctcagaggaagagaaaa
cttcaaattgcggattcactttccaaagcacttgaaatcggttctgtgttacctgttaca
gaagactctgtgggagcatggaaaagagccaaagcatgcaaagcaagcgaaaaggtggct
cccaaacacaaaacaatcattttgttgccaacagacttggcaagtcgactactggccagc
tcctttgaaagcagtggattaccacagctcacccgctacgattgtgaagtaaatgctccc
ctccaaggcagacagaacttgctacagggggaagaacttctcagagctctggatcaagtg
aattga
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